Genomic and Epidemiological Analysis of SARS-CoV-2 Viruses in Sri LankaMicrobiology Published on 2021-09-162022-10-31 Journal: Frontiers in Microbiology [Category] COVID-19, [키워드] acute respiratory syndrome B.1.1.7 B.1.1.7 lineage B.1.411 carried caused Coronavirus-2 country diagnostic dominant dominant lineage Epidemic epidemiological data genomic sequencing Infection Lineage lineages Molecular epidemiology Nasopharyngeal swab occurred outbreak pangolin lineages patients with COVID-19 Phylogenetic analysis prevalent replaced SARS-CoV-2 Spread sputum TMRCA Transmission virus Whole genome sequencing [DOI] 10.3389/fmicb.2021.722838 PMC 바로가기 [Article Type] Microbiology
The next phase of SARS-CoV-2 surveillance: real-time molecular epidemiology Reviews Published on 2021-09-092022-10-05 Journal: Nature Medicine [Category] SARS, 유전자 메커니즘, 진단, [키워드] acute respiratory syndrome Affect approach Characteristics coronavirus coronavirus disease COVID-19 diagnostics Effectiveness genomic genomic sequencing GISAID host range Immune escape knowledge Molecular epidemiology Mutation Nonpharmaceutical interventions pandemic Pathogenesis performed phenotypic platform public health real time resource review SARS-CoV-2 Support Surveillance Vaccines variant variants viral mutation virulence Whole-genome sequence whole-genome sequencing [DOI] 10.1038/s41591-021-01472-w [Article Type] Reviews
Advances in molecular epidemiology of cryptosporidiosis in dogs and catsReview Published on 2021-09-012023-06-22 Journal: International journal for parasitology [Category] 조류인플루엔자, [키워드] cats Cryptosporidium spp dogs Molecular epidemiology zoonosis [DOI] 10.1016/j.ijpara.2021.03.002 [Article Type] Review
Discovery of New Trichophyton Members, T. persicum and T. spiraliforme spp. nov., as a Cause of Highly Inflammatory Tinea Cases in Iran and Czechia이란과 체코에서 고도로 염증성 피부사상균증 사례의 원인으로서 새로운 트리코피톤 종, T. persicum 및 T. spiraliforme spp. nov.의 발견Research Article Published on 2021-09-012023-05-31 Journal: Microbiology Spectrum [Category] Fulltext, 백선증, 조류인플루엔자, [키워드] Trichophyton benhamiae complex dermatophytosis Molecular epidemiology multigene phylogeny skin mycoses zoonotic infections zoophilic dermatophytes [DOI] 10.1128/Spectrum.00284-21 PMC 바로가기 [Article Type] Research Article
Single-Amplicon Multiplex Real-Time Reverse Transcription-PCR with Tiled Probes To Detect SARS-CoV-2 spike Mutations Associated with Variants of ConcernArticle Published on 2021-08-252023-06-17 Journal: Journal of Clinical Microbiology [Category] MERS, SARS, [키워드] COVID-19 diagnostics Molecular epidemiology variants [DOI] 10.1128/JCM.01446-21 PMC 바로가기
Genomic analysis reveals a rapid spread and predominance of lambda (C.37) SARS‐COV‐2 lineage in Peru despite circulation of variants of concernShort Communication Published on 2021-08-202022-10-04 Journal: Journal of medical virology [Category] MERS, SARS, 변종, 유전자 메커니즘, [키워드] Analysis analyzed cause caused circulating variant circulation close monitoring death evade Genome sequencing greater Lambda Lineage Molecular epidemiology other variant pandemic predominant reveal SARS‐CoV‐2 South America Spread transmitted vaccination variant variants of concern virulence [DOI] 10.1002/jmv.27261 PMC 바로가기 [Article Type] Short Communication
Monitoring SARS-CoV-2 Populations in Wastewater by Amplicon Sequencing and Using the Novel Program SAM RefinerArticle Published on 2021-08-192022-10-28 Journal: Viruses [Category] COVID-19, SARS, [키워드] Amplicon Amplicon sequencing analyses B.1 B.1.1.7 chimeric computation coronavirus coronavirus 2 D614G domain function Gamma metagenomics Molecular epidemiology monitoring novel P.1 PCR polymerase chain Population Program respiratory SAM SARS-CoV-2 SARS-CoV-2 spike sequencing method Spread variant variants of concern variety viral population dynamics Viral variants wastewater [DOI] 10.3390/v13081647 PMC 바로가기 [Article Type] Article
Molecular epidemiology of Bordetella pertussis and analysis of vaccine antigen genes from clinical isolates from Shenzhen, China중국 선전에서의 임상 분리주로부터 보르데텔라 백일해의 분자 역학 및 백신 항원 유전자 분석Research Published on 2021-08-182024-07-28 Journal: Annals of Clinical Microbiology and Antimicrobials [Category] 백일해, [키워드] Bordetella pertussis Erythromycin-resistant Genotype Molecular epidemiology pertussis vaccine [DOI] 10.1186/s12941-021-00458-3 PMC 바로가기 [Article Type] Research
Hidden Viral Sequences in Public Sequencing Data and Warning for Future Emerging DiseasesResearch Article Published on 2021-08-172023-08-30 Journal: mBio [Category] E형 간염, [키워드] bioinformatics Molecular epidemiology public health RNA virus Virus diversity zoonosis [DOI] 10.1128/mBio.01638-21 PMC 바로가기 [Article Type] Research Article
Predominance of the SARS-CoV-2 Lineage P.1 and Its Sublineage P.1.2 in Patients from the Metropolitan Region of Porto Alegre, Southern Brazil in March 2021Article Published on 2021-08-052022-10-28 Journal: Pathogens [Category] COVID-19, [키워드] approaches assigned B.1.1.28 B.1.1.33 B.1.1.7 B.1.351 B.1.617.2 Brazil clade Consequences COVID-19 COVID-19 pandemic described diffusion dispersal E484K mutation epidemiological genomic High-throughput nucleotide sequencing identify Immunity Infectious diseases introduced Lineage molecular Molecular epidemiology molecular evolution Mortality Mutation P.1 P.2 Phylogenetic Phylogeny Porto Prevalence prevalent lineage Region replaced Rio Grande SARS-CoV-2 lineage sequence sequenced severe acute respiratory syndrome coronavirus 2 South Africa Substitution Surveillance the SARS-CoV-2 Transmissibility United Kingdom viral sample [DOI] 10.3390/pathogens10080988 PMC 바로가기 [Article Type] Article