Genomic Sequencing of SARS-CoV-2 E484K Variant B.1.243.1, Arizona, USASARS-CoV-2 E484K 변이체 B.1.243.1의 게놈 시퀀싱(미국 애리조나주)Dispatch Published on 2021-10-012022-09-10 Journal: Emerging Infectious Diseases [Category] MERS, SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Arizona circulating coronavirus coronavirus disease COVID-19 E484K emergent variant genomic Genomic surveillance Public health responses respiratory respiratory infections SARS-CoV-2 SARS-CoV-2 surveillance severe acute respiratory syndrome coronavirus 2 Surveillance United States USA variant variants viruses while zoonoses [DOI] 10.3201/eid2710.211189 PMC 바로가기 [Article Type] Dispatch
The Emergence of the New P.4 Lineage of SARS-CoV-2 With Spike L452R Mutation in Brazil브라질에서 스파이크 L452R 돌연변이가 있는 SARS-CoV-2의 새로운 P.4 계보의 출현Public Health Published on 2021-10-012022-09-11 Journal: Frontiers in Public Health [Category] MERS, SARS, 변종, 치료기술, [키워드] adaptive Amino acid Analysis B.1.1.28 Brazil circulating city clade COVID-19 emergence epidemiological evade Frequency genomic Genomic surveillance immune response L452R Lineage lineage P.4 matter Mutation mutations New P.1 pangolin Phylogenetic analysis Porto presenting Prevalence Protein RBD region Rio de Janeiro SARS-CoV-2 SARS-CoV-2 lineage sequence sequenced sequences spike Spike L452R Spike protein Surveillance the RBD the Spike Transmission variants while [DOI] 10.3389/fpubh.2021.745310 PMC 바로가기 [Article Type] Public Health
Clinical outcomes in COVID-19 patients infected with different SARS-CoV-2 variants in Marseille, France프랑스 마르세유에서 다양한 SARS-CoV-2 변종에 감염된 COVID-19 환자의 임상 결과Comparative Study Published on 2021-10-012022-09-11 Journal: Clinical microbiology and infection : the official [Category] SARS, 변종, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 adjusted odds ratio Anosmia Atypical characteristics of patient circulating clade clinical clinically cohort study coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 patient death defined disease Dyspnoea epidemiological epidemiologically Fever France Genomic surveillance Hospitalization Hospitalized Infection Inpatients intensive care intensive care unit less Lineage Marseille Mutation N501Y Next-generation sequencing Occurrence outcome outpatients Patient predominant reached reported retrospective cohort study rhinitis SARS-CoV-2 SARS-CoV-2 genomic surveillance SARS-CoV-2 variant severe acute respiratory syndrome Coronavirus severe acute respiratory syndrome coronavirus 2 Support transfer variant variants were infected [DOI] 10.1016/j.cmi.2021.05.029 PMC 바로가기 [Article Type] Comparative Study
Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity르완다에서 SARS-CoV-2의 게놈 시퀀싱은 혈통 다양성에서 들어오는 여행자의 중요성을 보여줍니다Article Published on 2021-09-292022-09-10 Journal: Nature Communications [Category] SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] A.23.1 airport analyzed B.1.1.7 B.1.351 B.1.351 variant circulating combating country COVID-19 COVID-19 transmission distribution Epidemiology Genetics research genomic genomic sequence Genomic surveillance highlight identify Infection International airport Lineage Local Metadata Phylogenomics Public health interventions reveal SARS-CoV-2 sequence Sequencing shift strain Strains Surveillance tested Transmission Transmission dynamics transmission rates Travel variant Viral whole genome sequence [DOI] 10.1038/s41467-021-25985-7 PMC 바로가기 [Article Type] Article
Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling PipelinesSARS-COV-2 ORF8에서 168- 뉴클레오티드 결실의 다중 발생, 표준 앰플 리콘 시퀀싱 및 변형 호출 파이프 라인에 의해 눈에 띄지 않습니다.Article Published on 2021-09-182022-09-10 Journal: Viruses [Category] SARS, 변종, 치료기술, [키워드] Amplicon Amplicon sequencing amplicons analyzed ARTIC protocol classical coding region Consensus Data analysis database Deletion deletions ENA endemism Genome Genomic surveillance hospital hotspot identify infection chain infection chains investigated Lineage Local Multiple Mutation Nanopore nanopore sequencing nucleotide nucleotides ORF8 ORF8 deletion ORF8 gene outbreak Outbreaks pandemic Physiology Positive selection protocols raw data reported SARS-CoV-2 SARS-CoV-2 genome sequences SARS-CoV-2 pandemic SARS-CoV-2 sequence sequence Sequencing Standard the SARS-CoV-2 viral genomics virus virus genome [DOI] 10.3390/v13091870 PMC 바로가기 [Article Type] Article
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinchSoftware Tool Article Published on 2021-09-172022-10-28 Journal: Wellcome Open Research [Category] COVID-19, [키워드] acute respiratory syndrome Air travel automated B.1.1.7 B.1.351 Cluster Combination coronavirus dispersal effort Genome sequencing genomic Genomic epidemiology genomic sequencing Genomic surveillance Genomics haplotypes Host include International Lineage London Mutation N501Y Novel coronavirus pandemic reported SARS-CoV-2 SARS-CoV-2 lineage Sequencing South Africa Spread Surveillance Travel United Kingdom variant virus Volume website [DOI] 10.12688/wellcomeopenres.16661.2 PMC 바로가기 [Article Type] Software Tool Article
High Rate of Mutational Events in SARS-CoV-2 Genomes across Brazilian Geographical Regions, February 2020 to June 20212020 년 2 월부터 2021 년 6 월까지 브라질 지리적 지역 전역의 SARS-COV-2 게놈에서의 높은 돌연변이 사건Article Published on 2021-09-102022-09-10 Journal: Viruses [Category] SARS, 변종, 유전자 메커니즘, [키워드] 3′ UTR Avian Influenza Brazil caused coding regions conducted confirmed case coronavirus country COVID-19 death demonstrated Europe event FIVE generate Genome genome analysis genomes genomic Genomic surveillance geographical regions had more identify India Influenza initiative mathematical correlation Missense Mutation nucleotide pandemic platform Rate regions reported SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 genomes SARS-CoV-2 sequence second wave Sequence analysis sequenced genomes shown single nucleotide variation single nucleotide variations SNVs South Africa South America spike gene synonymous variants variant variants variants hotspot variants of SARS-CoV-2 viral evolution virus while [DOI] 10.3390/v13091806 PMC 바로가기 [Article Type] Article
The Evolving Faces of the SARS-CoV-2 GenomeSARS-COV-2 게놈의 진화하는 얼굴Article Published on 2021-09-032022-09-10 Journal: Viruses [Category] SARS, 변종, 유전자 메커니즘, [키워드] Alpha Analysis applied Beta bioinformatics COVID-19 developmental Diversity epidemiological face Genetic Genomic surveillance landscape Lineage machine learning molecular Mutation pandemic provide SARS-CoV-2 genome SARS-CoV-2 lineages genomic surveillance self-organizing maps portrayal sequence single nucleotide variants Space the SARS-CoV-2 vaccination variants variants of concern virus virus genomes virus sequencing Visualization [DOI] 10.3390/v13091764 PMC 바로가기 [Article Type] Article
Genomic surveillance activities unveil the introduction of the SARS-CoV-2 B.1.525 variant of interest in Brazil: Case report게놈 감시 활동, 브라질에서 관심 있는 SARS-CoV-2 B.1.525 변종 도입 공개: 사례 보고Case Reports Published on 2021-09-012022-09-11 Journal: Journal of medical virology [Category] SARS, 변종, [키워드] activity appearance B.1.1.7 B.1.351 B.1.525 B.1.525 variant Brazil Evidence evidence of Genetic genomic Genomic surveillance imported case Nigeria P.1 pandemic public health authorities public health authority SARS-CoV-2 Surveillance the SARS-CoV-2 Transmission variant variants of SARS-CoV-2 [DOI] 10.1002/jmv.27086 PMC 바로가기 [Article Type] Case Reports
Genomic surveillance to combat COVID-19: challenges and opportunitiesCOVID-19 퇴치를 위한 게놈 감시: 도전과 기회Review Published on 2021-09-012022-09-11 Journal: The Lancet. Microbe [Category] Fulltext, SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] contagious Containment COVID-19 pandemic COVID-19 vaccine detect effective Effective strategies effective strategy effort Evidence facilitate Genomic surveillance greater increasingly mitigate morbidity morbidity and mortality Next-generation sequencing Novel viruses offer outbreak Phylogenetic provide Safe SARS-CoV-2 variant SARS-CoV-2 variants Spread Vaccine variant variants virulent whole genome widespread [DOI] 10.1016/S2666-5247(21)00121-X PMC 바로가기 [Article Type] Review