Global Avian Influenza Surveillance in Wild Birds: A Strategy to Capture Viral DiversityArticle Published on 2015-04-012023-05-31 Journal: Emerging Infectious Diseases [Category] Fulltext, 조류인플루엔자, [키워드] animal diseases disease reservoirs epidemiologic monitoring genetic databases Genetic variation genomic library global avian influenza surveillance Influenza Influenza virus molecular evolution OIE one health Organisation for Animal Health viral diversity viruses wild birds zoonoses [DOI] 10.3201/eid2104.141415 PMC 바로가기
Molecular characterization and phylogenetic analysis of transmissible gastroenteritis virus HX strain isolated from ChinaResearch Article Published on 2015-03-212022-10-28 Journal: BMC veterinary research [Category] Coronavirus, [키워드] amplified Analysis caused China cloned Cluster Complete conserved Deletion described diarrhea epidemic diarrhea etiological etiological agent Evolution gastroenteritis Genes genes encoding Genetic Genetic variation Genome indicated information insertion Isolation membrane Miller molecular ORF1a ORF1b ORF3a ORF3b Phylogenetic analysis Porcine transmissible gastroenteritis virus Proteins provide regions Result Sequence alignment sequenced structural proteins TGEV virus [DOI] 10.1186/s12917-015-0387-8 PMC 바로가기 [Article Type] Research Article
Molecular Characterization and Phylogenetic Analysis of Porcine Epidemic Diarrhea Viruses Associated with Outbreaks of Severe Diarrhea in Piglets in Jiangxi, China 2013Research Article Published on 2015-03-192022-10-28 Journal: PLoS ONE [Category] Coronavirus, [키워드] accumulated Amino acid amino acid substitution Analysis analyzed antigenic caused change Characteristics characterization characterized China Chinese Complete contagious death diarrhea Effectiveness epidemic diarrhea epitope Genetic Genetic variation Genome genome sequence hydrophilicity identify identity less Multiple Mutation N gene Neutralizing nucleotide ORF1a/b ORF3 outbreak PEDV proximal ranged S gene strain Strains structural protein unique Vaccine viral disease virus viruses vomiting watery [DOI] 10.1371/journal.pone.0120310 PMC 바로가기 [Article Type] Research Article
Selection on a Variant Associated with Improved Viral Clearance Drives Local, Adaptive Pseudogenization of Interferon Lambda 4 ( IFNL4 )개선된 바이러스 제거와 관련된 변이체에 대한 선택은 인터페론 람다 4(IFNL4)의 국소적 적응형 가성화를 유도합니다.Research Article Published on 2014-10-162022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] ABC adaptive allele America Antiviral antiviral activity approach Approximate Asia Asian association Bayesian clearance complex conserved disease drive driving East Elimination ENCODE environmental force Europe European Evidence evidence of fixation Frame Frequency functional Genetic genetic association Genetic variant Genetic variation groups HCV hepatitis C hepatitis C virus heterogeneity Human human populations IFN-λ IFNL4 Improved inactivation Infection insertion Interferon lambda Lambda mammal mammals Migration moderate Mutation Open reading frame phenotype phenotypic diversity Population populations positive Positive selection Protein provide pseudogene raise raising reached resulting Selection selective SNP SNPs strength susceptibility the strongest turn variant virus [DOI] 10.1371/journal.pgen.1004681 PMC 바로가기 [Article Type] Research Article
Introgression from Domestic Goat Generated Variation at the Major Histocompatibility Complex of Alpine Ibex알파인 아이벡스의 주요 조직 적합성 복합체에서 국내 염소 생성 변이로부터의 이입Research Article Published on 2014-06-192022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] adaptive allele alleles Alpine ibex balancing selection breed carried chromosomal region Clustering coding coding regions Defense Evidence functional gene genetic diversity Genetic polymorphism genetic variability Genetic variation genomes goat Haplotype haplotypes heterozygosity histocompatibility histocompatibility complex homozygous Ibex identify immune system individual introgression investigated involved loci locus Major major histocompatibility complex mechanism MHC non-coding region pathogen Pathogens polymorphism populations provide Research restored sequence sequenced Sequencing signature SNP SNP allele SNP alleles species Support susceptible thought two allele Two alleles Variation [DOI] 10.1371/journal.pgen.1004438 PMC 바로가기 [Article Type] Research Article
Genomic Profiling of Collaborative Cross Founder Mice Infected with Respiratory Viruses Reveals Novel Transcripts and Infection-Related Strain-Specific Gene and Isoform ExpressionMouse Genetic Resources Published on 2014-06-052022-10-31 Journal: G3 (Bethesda, Md.) [Category] Coronavirus, [키워드] acute respiratory syndrome aligned base pair collaborative cross conserved coronavirus differential expression eight elements expression gene transcription Genetic variation Genome genomes genomic host response identify Infection influenza A virus instance isoform isoform differential expression junctions knowledge lung mice mouse transcriptome annotation Mutation novel Profiling proportion recorded respiratory respiratory virus resulting RNA sample RNA-Seq sequence sequenced strain Strains transcribed transcript transcriptional transcriptional profile transcriptional response Transcriptome transcripts unlikely Variation viral infection [DOI] 10.1534/g3.114.011759 PMC 바로가기 [Article Type] Mouse Genetic Resources
Phenotype Ontologies and Cross-Species Analysis for Translational Research번역 연구를 위한 표현형 온톨로지 및 교차 종 분석Review Published on 2014-04-032022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] aetiology approach approaches comparable computational approach consequence disorders DNA sequence equivalence example Genetic variation hereditary traits human genetic variation identify involved mouse Neuropsychiatric ontologies organism orthologue orthologues phenotype phenotypic resulting significantly statistical traits zebrafish [DOI] 10.1371/journal.pgen.1004268 PMC 바로가기 [Article Type] Review
High Risk Population Isolate Reveals Low Frequency Variants Predisposing to Intracranial Aneurysms고위험군 분리가 두개내 동맥류에 걸리기 쉬운 저주파 변이를 나타냅니다Research Article Published on 2014-01-302022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] Aneurysm arteries Artery association Author balloon bleeding bottleneck events Brain Case-control cause compared complex complex diseases contribute Control controls develop different disease effect size effect sizes European population events explain explained Families Finn Finnish Finns FIVE fraction frequencies Frequency genetic background Genetic variant Genetic variation genotype imputation GWAS hemorrhage heritability identify incidence Inconclusive Intracranial intracranial aneurysms isolate isolates knowledge lead life-threatening loci locus low frequency MAF matched controls Netherland Netherlands Patient Population populations rare variant Rare variants related replicated rupture saccular stroke Study design Subarachnoid subarachnoid hemorrhage susceptibility tested utility variant variants [DOI] 10.1371/journal.pgen.1004134 PMC 바로가기 [Article Type] Research Article
Molecular Characterization of Major Structural Protein Genes of Avian Coronavirus Infectious Bronchitis Virus Isolates in Southern ChinaArticle Published on 2013-12-042022-10-28 Journal: Viruses [Category] Coronavirus, MERS, [키워드] addition amino acid sequence Amino acid sequences Analysis avian coronavirus characterization China circulating conducted detected different driven by Entropy Evolution exhibited FIVE genetic diversity genetic information Genetic variation Genotype IBV indicate Infectious Bronchitis Virus isolate less M gene Major N gene Phylogenetic analysis Phylogenetic tree Positive selection predominant Proteins recombinant Recombination Result strain Topology Vaccine vaccine strain Variation [DOI] 10.3390/v5123007 PMC 바로가기 [Article Type] Article
Detection and Molecular Diversity of Spike Gene of Porcine Epidemic Diarrhea Virus in ChinaArticle Published on 2013-10-222022-10-28 Journal: Viruses [Category] Coronavirus, MERS, [키워드] amino acids sequence Analysis caused China Chinese classical detection detection rate Diversity epidemic diarrhea full-length S Gene Genetic variation Hainan heterogeneity high mortality homology indicated insertion morbidity MOST Neonatal nucleotide deletion nucleotide sequence PEDV Phylogenetic analysis positive predominant regions RT-PCR S gene sequenced spike strain variant variants virus [DOI] 10.3390/v5102601 PMC 바로가기 [Article Type] Article