Neighbourhood watch: genomic epidemiology of SARS-CoV-2 variants circulating in a German federal state, Mecklenburg-Western Pomerania, in 2020–2022article Published on 2023-08-222024-09-05 Journal: Emerging Microbes & Infections [Category] update2024, [키워드] Genomic epidemiology Mecklenburg-Western Pomerania SARS-CoV-2 Surveillance Whole genome sequencing [DOI] 10.1080/22221751.2023.2245916 PMC 바로가기 [Article Type] article
Text mining biomedical literature to identify extremely unbalanced data for digital epidemiology and systematic reviews: dataset and methods for a SARS-CoV-2 genomic epidemiology studyArticle Published on 2023-08-042024-09-05 Journal: medRxiv [Category] update2024, [키워드] Genomic epidemiology natural language processing sentence classification [DOI] 10.1101/2023.07.29.23293370 PMC 바로가기 [Article Type] Article
The importance of equally accessible genomic surveillance in the age of pandemicsarticle Published on 2023-05-182024-09-05 Journal: Biologia futura [Category] update2024, [키워드] Disease containment Genomic epidemiology pandemic Sequencing Sequencing equity [DOI] 10.1007/s42977-023-00164-5 PMC 바로가기 [Article Type] article
Tracking the prevalence and emergence of SARS CoV2 variants of concern using a regional genomic surveillance programArticle Published on 2023-05-102024-09-05 Journal: medRxiv [Category] update2024, [키워드] ARTIC sequencing Genomic epidemiology SARS-CoV-2 [DOI] 10.1101/2023.05.08.23289687 PMC 바로가기 [Article Type] Article
Novel Network Method Major Minor Variation Clustering Enables Identification of Poliovirus Clusters with High-Resolution Linkagesarticle Published on 2023-04-302024-09-01 Journal: Journal of Computational Biology [Category] 폴리오, [키워드] Genomic epidemiology network modeling Polio Eradication Whole genome sequencing [Article Type] article
Zooanthroponotic transmission of SARS-CoV-2 and host-specific viral mutations revealed by genome-wide phylogenetic analysisArticle Published on 2023-04-042023-06-22 Journal: eLife [Category] 조류인플루엔자, [키워드] Evolutionary biology Genome-wide association study Genomic epidemiology Phylogeny SARS-CoV-2 viral evolution viruses zooanthroponosis [DOI] 10.7554/eLife.83685 PMC 바로가기
Transmission of SARS-CoV-2 Omicron Variant under a Dynamic Clearance Strategy in Shandong, Chinaarticle Published on 2023-03-142024-09-05 Journal: Microbiology Spectrum [Category] update2024, [키워드] Genomic epidemiology Omicron variant Phylogenetic analysis SARS-CoV-2 Transmission [DOI] 10.1128/spectrum.04632-22 PMC 바로가기 [Article Type] article
Public health interventions successfully mitigated multiple incursions of SARS-CoV-2 Delta variant in the Australian Capital Territoryarticle Published on 2023-02-142024-09-05 Journal: Epidemiology and Infection [Category] update2024, [키워드] Australian Capital Territory COVID-19 Genomic epidemiology pandemic SARS-CoV-2 [DOI] 10.1017/S0950268823000201 PMC 바로가기 [Article Type] article
Deciphering the Tangible Spatio-Temporal Spread of a 25-Year Tuberculosis Outbreak Boosted by Social Determinantsarticle Published on 2023-02-142024-09-05 Journal: Microbiology Spectrum [Category] update2024, [키워드] Genomic epidemiology outbreak phylodynamics Tuberculosis whole-genome sequencing [DOI] 10.1128/spectrum.02826-22 PMC 바로가기 [Article Type] article
Low Viral Diversity Limits the Effectiveness of Sequence-Based Transmission Inference for SARS-CoV-2article Published on 2023-01-252024-09-05 Journal: mSphere [Category] update2024, [키워드] Genomic epidemiology SARS-CoV-2 transmission networks [DOI] 10.1128/msphere.00544-22 PMC 바로가기 [Article Type] article