Clinical features of the first critical case of acute encephalitis caused by the avian influenza A (H5N6) virusCase Reports Published on 2022-12-012023-06-14 Journal: Emerging Microbes & Infections [Category] Fulltext, 조류인플루엔자, [키워드] acute encephalitis H5N6 influenza A virus Phylogenetic analysis wild waterfowls. [DOI] 10.1080/22221751.2022.2122584 PMC 바로가기 [Article Type] Case Reports
A community-wide epidemic of hepatitis A virus genotype IA associated with consumption of shellfish in Yantai, eastern China, January to March 2020Article Published on 2022-11-302023-05-31 Journal: Human vaccines & immunotherapeutics [Category] A형 간염, Fulltext, [키워드] Epidemic Genotype hepatitis A virus Phylogenetic analysis Risk factors Shellfish. [DOI] 10.1080/21645515.2022.2106081 PMC 바로가기
Bioinformatics pipeline unveils genetic variability to synthetic vaccine design for Indian SARS-CoV-2 genomesArticle Published on 2022-11-012022-11-15 Journal: International immunopharmacology [Category] SARS, 치료기술, 치료제, [키워드] aligned amino acid change antigenic antigenic epitopes B-cell epitope bioinformatics bioinformatics pipeline can be used clade clades conserved conserved regions criteria epitope Evolution genetic variability genomic HLA allele identify immunogenic MAFFT MHC-I MHC-II Multiple sequence alignment Mutation Nextstrain Non-synonymous Non-Synonymous Signature SNP performed Phylogenetic analysis primer probe Protein Region regions reported resulting SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 pandemic selected SNP SNPs T-cell T-cell epitope T-cell epitopes T-cell epitopes. unique Vaccine Vaccine design virus virus detection virus genome [DOI] 10.1016/j.intimp.2022.109224 PMC 바로가기
Natural SARS-CoV- 2 infection in domestic cats and dogs of humans diagnosed with COVID-19 in Valle de Aburrá, AntioquiaArticle Published on 2022-10-312023-07-10 Journal: Biomédica [Category] COVID19(2023년), [키워드] Coronavirus infections Phylogenetic analysis Severe acute respiratory syndrome viral host Infección por coronavirus. zoonoses zoonotic transmission [DOI] 10.7705/biomedica.6407 PMC 바로가기
Severe Acute Respiratory Syndrome Coronavirus 2 Delta Vaccine Breakthrough Transmissibility in Alachua County, FloridaArticle Published on 2022-10-292022-11-16 Journal: Clinical Infectious Diseases: An Official Publicat [Category] COVID19(2023년), SARS, 변종, [키워드] acute infection acute respiratory syndrome association average booster caused Characteristics conducted Contact Contact tracing coronavirus coronavirus 2 Delta delta variant Epidemic evaluate exhibited Florida genomes Immunity Infection interquartile range Lineage majority occurred Patient Phylogenetic Phylogenetic analysis public health question raising regression analysis respiratory SARS-CoV-2 SARS-CoV2 sequence sequenced Spread threshold through contact Transmissibility Transmission vaccinated individual vaccinated individuals vaccination vaccination. Vaccine vaccine dose Viral RNA viral RNA quantification were used [DOI] 10.1093/cid/ciac197 PMC 바로가기
Evidence for flock transmission of individual subtypes and strains of avian influenza viruses: A monitoring study of wild birds in KazakhstanArticle Published on 2022-10-152023-06-22 Journal: Virus research [Category] 조류인플루엔자, [키워드] Avian influenza virus H3N8 subtype Kazakhstan Phylogenetic analysis Wild birds monitoring. [DOI] 10.1016/j.virusres.2022.198898 PMC 바로가기
Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021Article Published on 2022-10-012022-11-16 Journal: Eurosurveillance [Category] COVID19(2023년), SARS, 유전자 메커니즘, 치료기술, [키워드] circulating Cluster community transmission complex Contact Contact tracing contribute dataset deep backward contact tracing defined downstream epidemiologically Epidemiology European event Evidence genomic Genomic surveillance Germany High-resolution independent Infection infections Nanopore real-time sequencing next generation sequencing onward transmission Phylogenetic analysis provided reveal SARS-CoV-2 SARS-CoV-2 genome SARS-COV-2 infection SARS-CoV-2 infections SARS-CoV-2 isolate SARS-CoV-2 transmission shown Spain Surveillance Transmission travel-associated SARS-CoV-2 infections. viral genome viral strain [DOI] 10.2807/1560-7917.ES.2022.27.43.2101089 PMC 바로가기
Unexpected details regarding nosocomial transmission revealed by whole-genome sequencing of severe acute respiratory coronavirus virus 2 (SARS-CoV-2)Article Published on 2022-10-012022-11-16 Journal: Infection Control and Hospital Epidemiology [Category] COVID19(2023년), SARS, 유전자 메커니즘, [키워드] age Analysis analysis clade Clinical characteristics cohort study collected coronavirus disease COVID-19 Deceased died epidemiological epidemiological data evaluate event Genetic HCW HCWs healthcare worker hospital identify indicated Infection prevention knowledge male measure Measures mechanism median medical records nasopharyngeal sample nosocomial nosocomial COVID-19 Nosocomial infection NPs outbreak outcome Patient patients performed Phylogenetic analysis positive provided Respiratory Coronavirus RNA SARS-CoV-2 selected significantly higher subclade supported Transmission viral clade virus WGS whole-genome sequencing [DOI] 10.1017/ice.2021.374 PMC 바로가기
Genomic diversity of SARS-CoV-2 in Pakistan during the fourth wave of pandemic전염병의 네 번째 물결 동안 파키스탄에서 SARS-CoV-2의 게놈 다양성Article Published on 2022-10-012022-09-11 Journal: Journal of medical virology [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] A222V acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 affected Alpha B.1.617.2 Beta variant characteristic circulating circulation conducted coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 D950N delta variant Delta variants exhibited followed by G142D genomic Genomic surveillance Germany globe highlight Illumina isolate isolates Karachi L452R lineages P681R Pakistan pandemic Patient Phylogenetic analysis SARS-CoV-2 SARS-CoV-2 strain severe acute respiratory syndrome Coronavirus Singapore spike mutation T19R T478K United Kingdom V483A variant variants variants of concern variants of concern. whole-genome sequencing [DOI] 10.1002/jmv.27957 PMC 바로가기 [Article Type] Article
Genomic surveillance of the Lambda SARS-CoV-2 variant in a global phylogenetic context글로벌 계통 발생학적 맥락에서 Lambda SARS-CoV-2 변이체의 게놈 감시Article Published on 2022-10-012022-09-11 Journal: Journal of medical virology [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Analysis carried clade coronavirus country detect determine downloaded Endemic epidemiologically Europe genomic Genomic surveillance GISAID GISAID database identify isolate Lambda Lineage Local local outbreak local outbreaks local outbreaks.. North America occurred Pandemics past Phylogenetic Phylogenetic analysis Phylogenetic relationship prevalent SARS-CoV-2 SARS-CoV-2 variant sequence Sequencing severe acute respiratory syndrome Coronavirus South America spike spike mutation spike mutations Spread Surveillance variant variants of concern virus [DOI] 10.1002/jmv.27889 PMC 바로가기 [Article Type] Article