Delay in the diagnosis of Brucella abortus bacteremia in a nonendemic country: a case reportCase Report Published on 2024-05-132024-09-05 Journal: BMC Infectious Diseases [Category] update2024, [키워드] Bacteremia Brucella abortus brucellosis MALDI–TOF MS whole-genome sequencing [DOI] 10.1186/s12879-024-09377-y PMC 바로가기 [Article Type] Case Report
DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virusResearch Published on 2024-05-012024-09-05 Journal: BMC Genomics [Category] update2024, [키워드] Amplicon sequencing dengue virus Genomic surveillance Next-generation sequencing whole-genome sequencing [DOI] 10.1186/s12864-024-10350-x PMC 바로가기 [Article Type] Research
Lessons learned: overcoming common challenges in reconstructing the SARS-CoV-2 genome from short-read sequencing data via CoVpipe2Software Tool Article Published on 2024-04-162024-09-05 Journal: F1000Research [Category] update2024, [키워드] amplicons genome reconstruction Illumina Nextflow pipeline SARS-CoV-2 short reads virus bioinformatics WGS whole-genome sequencing [DOI] 10.12688/f1000research.136683.2 PMC 바로가기 [Article Type] Software Tool Article
Strengthening Bordetella pertussis genomic surveillance by direct sequencing of residual positive specimens보르데텔라 퍼투시스 유전체 감시를 잔여 양성 샘플의 직접 시퀀싱으로 강화하기Article Published on 2024-04-102024-08-25 Journal: Journal of Clinical Microbiology [Category] 백일해, [키워드] Bordetella pertussis metagenomics Surveillance whole-genome sequencing
Strengthening Bordetella pertussis genomic surveillance by direct sequencing of residual positive specimensBacteriology Published on 2024-04-062024-09-05 Journal: Journal of Clinical Microbiology [Category] update2024, [키워드] Bordetella pertussis metagenomics Surveillance whole-genome sequencing [DOI] 10.1128/jcm.01653-23 PMC 바로가기 [Article Type] Bacteriology
Bus Riding as Amplification Mechanism for SARS-CoV-2 Transmission, Germany, 2021 1Research Published on 2024-04-012024-09-05 Journal: Emerging Infectious Diseases [Category] update2024, [키워드] 2019 novel coronavirus disease bus coronavirus disease COVID-19 Germany outbreak respiratory infections SARS-CoV-2 Schools severe acute respiratory syndrome coronavirus 2 Travel viruses whole-genome sequencing zoonoses [DOI] 10.3201/eid3004.231299 PMC 바로가기 [Article Type] Research
Strain identity of Bordetella pertussis isolates from household members based on whole-genome sequencingarticle Published on 2024-03-312024-09-01 Journal: Microbiology and Immunology [Category] 백일해, [키워드] Bordetella pertussis household transmission nicotinate phosphoribosyltransferase single-nucleotide polymorphism strain identity whole-genome sequencing [Article Type] article
Whole-Genome Sequencing and Mutation Analyses of SARS-CoV-2 Isolates from IndonesiaArticle Published on 2024-03-252024-09-05 Journal: Pathogens [Category] update2024, [키워드] Genomic surveillance Mutation SARS-CoV-2 whole-genome sequencing [DOI] 10.3390/pathogens13040279 PMC 바로가기 [Article Type] Article
Rapid, high-throughput, cost-effective whole-genome sequencing of SARS-CoV-2 using a condensed library preparation of the Illumina DNA Prep kitVirology Published on 2024-03-052024-09-05 Journal: Journal of Clinical Microbiology [Category] update2024, [키워드] COVID-19 public health SARS-CoV-2 Testing whole-genome sequencing [DOI] 10.1128/jcm.00103-22 PMC 바로가기 [Article Type] Virology
Isolation, Identification, Antimicrobial Resistance, Genotyping, and Whole-Genome Sequencing Analysis of Salmonella Enteritidis Isolated from a Food-Poisoning IncidentOriginal Paper Published on 2024-03-042024-09-05 Journal: Polish journal of microbiology [Category] update2024, [키워드] Evolution resistance genes Salmonella virulence genes whole-genome sequencing [DOI] 10.33073/pjm-2024-008 PMC 바로가기 [Article Type] Original Paper