Quantifying connectivity between local Plasmodium falciparum malaria parasite populations using identity by descent혈통에 의한 신원을 사용하여 지역 Plasmodium falciparum 말라리아 기생충 개체군 간의 연결성 정량화Research Article Published on 2017-10-272022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, 말라리아, [키워드] Accessibility Analysis approach assessment association Author best biological processe biological processes can not chance classic classical clinics collected data set descent detect disease dispersal Divergence drug resistance Ecology effort eliminating endangered species Epidemiology Evolution Genetic genomic data Genomics genotyped human pathogen IBD identity identity by descent increasingly inheritance knowledge Local malaria malaria parasite malaria parasites measure Molecular epidemiology nucleotide organism Organisms parasite Plasmodium falciparum Population power provide proximal Recombination required robust sampling sequenced significant decrease Single nucleotide polymorphism single nucleotide polymorphisms SNPs spatiotemporal Spread Surveillance Transmission transmission patterns whole genome [DOI] 10.1371/journal.pgen.1007065 PMC 바로가기 [Article Type] Research Article
Detection and phylogenetic analyses of spike genes in porcine epidemic diarrhea virus strains circulating in China in 2016–2017Short Report Published on 2017-10-102022-10-28 Journal: Virology Journal [Category] Coronavirus, [키워드] addition Amino acid Analysis analyzed Characteristics China Chinese circulating classical collected Complete contribute detection diarrhea epidemic diarrhea Epidemiology gastroenteritis Genetic genetic diversity Hainan identity indicated insertion island knowledge Molecular epidemiology nucleotide outbreak Pathogens PCR PEDV Phylogenetic analysis Porcine deltacoronavirus positive Result S gene sequenced Sequencing spike gene strain TGEV the epidemic the vaccine vaccine strain virulent virus virus strain [DOI] 10.1186/s12985-017-0860-z PMC 바로가기 [Article Type] Short Report
Using Viral Gene Sequences to Compare and Explain the Heterogeneous Spatial Dynamics of Virus EpidemicsArticle Published on 2017-10-012023-06-21 Journal: Molecular Biology and Evolution [Category] 조류인플루엔자, [키워드] Molecular epidemiology phylodynamics RABV relaxed random walk Spread viral phylogeography. [DOI] 10.1093/molbev/msx176
The high frequency of non-aspartic acid residues at HA222 in influenza A(H1N1) 2009 pandemic viruses is associated with mortality during the upsurge of 2015: a molecular and epidemiological study from central IndiaArticle Published on 2017-10-012023-06-23 Journal: Epidemiology and Infection [Category] 신종인플루엔자, [키워드] Epidemiology India influenza A Molecular epidemiology polymorphism [DOI] 10.1017/S0950268817001595 PMC 바로가기
Characterization of group B coxsackieviruses isolated from non-polio acute flaccid paralysis patients in Pakistan: vital assessment before polio eradicationarticle Published on 2017-09-302024-09-01 Journal: Epidemiology and Infection [Category] 폴리오, [키워드] acute flaccid paralysis coxsackievirus B enterovirus Molecular epidemiology Pakistan [Article Type] article
Think globally, act locally: Phylodynamic reconstruction of infectious bronchitis virus (IBV) QX genotype (GI-19 lineage) reveals different population dynamics and spreading patterns when evaluated on different epidemiological scalesResearch Article Published on 2017-09-072022-10-28 Journal: PLoS ONE [Category] Coronavirus, MERS, [키워드] Analysis approach Asian Bayesian bronchitis characterized China circulation collected Combination connection contribute country diffusion disease effective effort epidemiological epidemiological link European evaluated event Evolution fluctuation Genotype Health highlighting IBV implementation in viral Infectious Bronchitis Virus International Italian region Italy limit Lineage Local Measures Middle East Migration Molecular epidemiology occur performed persistence phylodynamic Prevent producing question reconstructed reveal sequence Spread strain Strains successive waves supported Threats transmission route virus [DOI] 10.1371/journal.pone.0184401 PMC 바로가기 [Article Type] Research Article
Molecular characterisation of Salmonella strains isolated from outbreaks and sporadic cases of diarrhoea occurred in Paraná State, South of Brazilarticle Published on 2017-07-312024-09-01 Journal: Epidemiology and Infection [Category] 살모넬라증, [키워드] MAPLT Molecular epidemiology PFGE Salmonella [Article Type] article
Novel Alphacoronaviruses and Paramyxoviruses Cocirculate with Type 1 and Severe Acute Respiratory System (SARS)-Related Betacoronaviruses in Synanthropic Bats of LuxembourgArticle Published on 2017-07-142023-08-30 Journal: Applied and Environmental Microbiology [Category] E형 간염, [키워드] Chiroptera coronavirus Luxembourg Molecular epidemiology paramyxovirus Phylogenetic analysis surveillance studies Virology zoonotic infections [DOI] 10.1128/AEM.01326-17 PMC 바로가기
Porcine Epidemic Diarrhea in Europe: In-Detail Analyses of Disease Dynamics and Molecular EpidemiologyArticle Published on 2017-07-062022-10-28 Journal: Viruses [Category] Coronavirus, MERS, [키워드] addition Analysis Asia caused Cluster coding sequence collected Complete contagious correlation courses data set data sets disease Dynamics enterobacteria epidemic diarrhea Europe European country Factor genomes genus Alphacoronavirus Germany homogeneous investigated metagenome metagenomic Molecular epidemiology new virus Next-generation sequencing nine no correlation outbreak PEDV phylogenetic analyses Porcine epidemic diarrhea Porcine epidemic diarrhea virus reconstructed representing Secondary infection sequence sequenced Strains the Coronaviridae The United States virus while [DOI] 10.3390/v9070177 PMC 바로가기 [Article Type] Article
GENETIC CHARACTERIZATION OF H13 AND H16 INFLUENZA A VIRUSES IN GULLS (LARUS SPP.) WITH CLINICALLY SEVERE DISEASE AND CONCURRENT CIRCOVIRUS INFECTIONArticle Published on 2017-07-012023-06-21 Journal: Journal of wildlife diseases [Category] 조류인플루엔자, [키워드] Circovirus Gulls H13 H16 influenza A virus Molecular epidemiology [DOI] 10.7589/2016-09-212