Investigating the rise of Omicron variant through genomic surveillance of SARS-CoV-2 infections in a highly vaccinated university populationPathogens and Epidemiology Published on 2024-02-092024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] Genomic surveillance omicron phylodynamics SARS-CoV-2 Sequencing university population [DOI] 10.1099/mgen.0.001194 PMC 바로가기 [Article Type] Pathogens and Epidemiology
Temporal Dynamics and Genomic Landscape of SARS-CoV-2 After Four Years of EvolutionPublic Health Published on 2024-02-052024-09-05 Journal: Cureus [Category] update2024, [키워드] COVID-19 Genomic surveillance lineages mutations recombinant variants SARS-CoV-2 viral evolution [DOI] 10.7759/cureus.53654 PMC 바로가기 [Article Type] Public Health
Editorial: Integration of NGS in clinical and public health microbiology workflows: applications, compliance, quality considerationsPublic Health Editorial Published on 2024-01-232024-09-05 Journal: Frontiers in public health [Category] update2024, [키워드] clinical microbiology Genomic surveillance Infectious diseases metagenomics next-generation sequencing (NGS) Outbreak investigation Public health microbiology Whole-genome sequencing (wgs) [DOI] 10.3389/fpubh.2024.1357098 PMC 바로가기 [Article Type] Public Health Editorial
Increase in invasive group A streptococcal infections in Milan, Italy: a genomic and clinical characterizationMicrobiology Original Research Published on 2024-01-112024-09-05 Journal: Frontiers in Microbiology [Category] update2024, [키워드] GAS Genomic surveillance necrotizing fasciitis Streptococcus pyogenes virulence factors WGS [DOI] 10.3389/fmicb.2023.1287522 PMC 바로가기 [Article Type] Microbiology Original Research
Timely Monitoring of SARS-CoV-2 RNA Fragments in Wastewater Shows the Emergence of JN.1 (BA.2.86.1.1, Clade 23I) in Berlin, GermanyCommunication Published on 2024-01-102024-09-05 Journal: Viruses [Category] update2024, [키워드] Genomic surveillance Germany omicron SARS-CoV-2 Wastewater sequencing [DOI] 10.3390/v16010102 PMC 바로가기 [Article Type] Communication
A regional genomic surveillance program is implemented to monitor the occurrence and emergence of SARS-CoV-2 variants in Yubei District, ChinaResearch Published on 2024-01-082024-09-05 Journal: Virology Journal [Category] update2024, [키워드] Bayesian analysis Epidemiology Genomic surveillance phylogenetics SARS-CoV-2 Whole genome amplicon sequencing YuBei [DOI] 10.1186/s12985-023-02279-6 PMC 바로가기 [Article Type] Research
A response playbook for early detection and population surveillance of new SARS-CoV-2 variants in a regional public health laboratoryResearch Published on 2024-01-022024-09-05 Journal: BMC Public Health [Category] update2024, [키워드] disease outbreaks Genomic surveillance Infectious disease Public Health Preparedness public health systems SARS-CoV-2 Surveillance [DOI] 10.1186/s12889-023-17536-0 PMC 바로가기 [Article Type] Research
Spatiotemporal evolution of SARS-CoV-2 in the Bangkok metropolitan region, Thailand, 2020–2022: implications for future outbreak preparednessPathogens and Epidemiology Published on 2023-12-202024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] COVID-19 Genomic epidemiology Genomic surveillance public health Spatiotemporal analysis Thailand [DOI] 10.1099/mgen.0.001170 PMC 바로가기 [Article Type] Pathogens and Epidemiology
SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in MexicoPathogens and Epidemiology Published on 2023-12-192024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] emerging sublineages Genomic surveillance Mexico omicron SARS-CoV-2 [DOI] 10.1099/mgen.0.001120 PMC 바로가기 [Article Type] Pathogens and Epidemiology
What is the functional reach of wastewater surveillance for respiratory viruses, pathogenic viruses of concern, and bacterial antibiotic resistance genes of interest?Perspective Published on 2023-12-182024-09-05 Journal: Human Genomics [Category] update2024, [키워드] Genomic surveillance molecular surveillance Outbreak response Reporting stakeholders wastewater [DOI] 10.1186/s40246-023-00563-8 PMC 바로가기 [Article Type] Perspective