A Gapless, Unambiguous RNA Metagenome-Assembled Genome Sequence of a Unique SARS-CoV-2 Variant Encoding Spike S813I and ORF1a A859V SubstitutionsArticle Published on 2021-02-012023-07-11 Journal: Omics : a journal of integrative biology [Category] SARS, [키워드] COVID-19 Genomic epidemiology High-throughput sequencing pandemic replicase spike protein. [DOI] 10.1089/omi.2020.0194 PMC 바로가기
Reliable and accurate diagnostics from highly multiplexed sequencing assays고도로 다중화된 시퀀싱 분석에서 신뢰할 수 있고 정확한 진단Article Published on 2020-12-102022-09-01 Journal: Scientific Reports [Category] MERS, SARS, 진단, [키워드] Algorithms Analysis Clinical use Computational biology and bioinformatics diagnostic diagnostic tests diagnostics effective High-throughput sequencing Infectious diseases Interpretation kallisto memory Novel coronavirus pandemic principle robust RT-qPCR SARS-COV-2 infection SARS-CoV-2 sequencing secure Sequencing sequencing data statistical [DOI] 10.1038/s41598-020-78942-7 PMC 바로가기 [Article Type] Article
An online coronavirus analysis platform from the National Genomics Data CenterMulticenter Study Published on 2020-11-182023-07-12 Journal: Zoological research [Category] SARS, [키워드] coronavirus de novo assembly. genome annotation High-throughput sequencing Variant identification [DOI] 10.24272/j.issn.2095-8137.2020.065 PMC 바로가기 [Article Type] Multicenter Study
Comprehensive pathogen detection in sera of Kawasaki disease patients by high-throughput sequencing: a retrospective exploratory studyResearch Article Published on 2020-10-152022-10-28 Journal: BMC Pediatrics [Category] COVID-19, [키워드] Acinetobacter acute phase Analysis Anelloviridae Artery Bacteria Bacterial causative pathogen children Comprehensive contaminant Control controls diagnosed Diagnosis DNA and RNA DNA viruses early stage eight equine exploratory study HHV-6B High-throughput sequencing human herpesvirus 6B identify immune system induce infectious anemia investigated Kawasaki disease Multiple pathogen pathogen detection Patient Pseudomona Result retrospective RNA virus sequence Sequencing sera serum sample serum samples stimulate Symptoms transcriptase Trigger Vasculitis [DOI] 10.1186/s12887-020-02380-7 PMC 바로가기 [Article Type] Research Article
Inferring B cell specificity for vaccines using a Bayesian mixture modelMethodology Article Published on 2020-02-222023-05-24 Journal: BMC Genomics [Category] B형 간염, Fulltext, [키워드] B cell receptor High-throughput sequencing immune repertoire vaccination [DOI] 10.1186/s12864-020-6571-7 PMC 바로가기 [Article Type] Methodology Article
Virus Metagenomics in Farm Animals: A Systematic ReviewReview Published on 2020-01-162023-05-31 Journal: Viruses [Category] Fulltext, 조류인플루엔자, [키워드] animal reservoir deep sequencing Emerging infectious diseases High-throughput sequencing livestock NGS one health viral metagenomics virome zoonosis [DOI] 10.3390/v12010107 PMC 바로가기 [Article Type] Review
Dynamic changes of T cell receptor repertoires in patients with hepatitis B virus-related acute-on-chronic liver failureArticle Published on 2020-01-012023-06-13 Journal: Hepatology international [Category] B형 간염, [키워드] Acute-on-chronic liver failure Beta chain clonal expansion Clonotype complementarity-determining region Diversity Hepatitis B virus High-throughput sequencing repertoire T cell receptor. [DOI] 10.1007/s12072-019-10008-x PMC 바로가기
Attenuation of Infectious Bronchitis Virus in Eggs Results in Different Patterns of Genomic Variation across Multiple ReplicatesGenetic Diversity and Evolution Published on 2019-05-012022-10-30 Journal: Journal of Virology [Category] Coronavirus, MERS, [키워드] attenuate attenuation bronchitis cause Cell contagious coronavirus cultures develop Effective vaccines Egg Evolution Ex vivo exhibited Final genomic genomic variation growth High-throughput sequencing highlight IBV in vivo independent Infectious Bronchitis Virus kidney Live attenuated vaccine mechanism molecular mechanism Multiple Mutation nucleocapsid organ pattern phenotype Population raise replicate replicates required Respiratory disease Result sequence sequenced Single nucleotide polymorphism SNP SNPs structural protein tracheal Vaccine Vaccine design Vaccines Variation virulence virulent virus virus [DOI] 10.1128/JVI.00492-19 PMC 바로가기 [Article Type] Genetic Diversity and Evolution
Integrated analysis of microRNA-mRNA expression in A549 cells infected with influenza A viruses (IAVs) from different host speciesArticle Published on 2019-04-022023-06-23 Journal: Virus research [Category] 신종인플루엔자, [키워드] Different host species High-throughput sequencing influenza A Microarray MicroRNAs mRNA. [DOI] 10.1016/j.virusres.2018.12.016 PMC 바로가기
A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43Article Published on 2019-03-092023-06-15 Journal: Virology [Category] MERS, [키워드] bioinformatics Complete genome coronavirus High-throughput sequencing [DOI] 10.1016/j.virol.2019.03.006 PMC 바로가기 [Article Type] Article