ORF1a
[대역어] None
[용어속성] Gene
[용어속성] Gene
1 H, 13 C, and 15 N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein)
Article
[키워드] 5′ untranslated region
backbone
biochemical
C-terminus
caused
cleaved
complexes
coronavirus 2
COVID-19
COVID-19 pandemic
domain
drug target
element
ENCODE
facilitate
full-length SARS-CoV-2
Health
Host
immune function
Interaction
Lung disease
N-terminal domain
New drug targets
NMR
NMR spectroscopy
non-structural protein
non-structural proteins
nsp1
Open reading frame
ORF1a
ORF1b
ORFs
overlapping
physiological function
polyprotein
Protein
Proteins
Research
respiratory
RNA
SARS-CoV-2
SARS-CoV-2 genome
secondary structure
Support
suppresse
the SARS-CoV-2 genome
translation
Treatment
UTR
Viral RNA
virulence
[DOI] 10.1007/s12104-021-10019-6 PMC 바로가기 [Article Type] Article
[DOI] 10.1007/s12104-021-10019-6 PMC 바로가기 [Article Type] Article
Molecular characterization and the mutation pattern of SARS-CoV-2 during first and second wave outbreaks in Hiroshima, Japan
일본 히로시마에서 1차 및 2차 유행 중 SARS-CoV-2의 분자 특성 및 돌연변이 패턴
Research Article
[키워드] addition
Amino acid
amino acid change
amino acid changes
Analysis
Asian
base substitution
cause
Control
D614G variant
D614G variants
defect
European
examined
First wave
GenBank
GISAID
Hiroshima
indicated
insertion
Japan
local outbreak
local outbreaks
molecular
Mutation
mutation rate
mutations
nasal swab
nested PCR
Next-generation sequencing
nucleotide
occurred
ORF1a
ORF1b
ORF8
ORF8 protein
outbreak
PCR
performed
Phylogenetic tree
predominant
Primers
ranged
Result
retrieved
RT-qPCR
SARS-CoV-2
SARS-CoV-2 strain
SARS-CoV-2 strains
second wave
sequence
Seven
single-nucleotide
strain
Strains
undetectable
Viral
Viral load
[DOI] 10.1371/journal.pone.0246383 PMC 바로가기 [Article Type] Research Article
[DOI] 10.1371/journal.pone.0246383 PMC 바로가기 [Article Type] Research Article
Rational design of multi epitope-based subunit vaccine by exploring MERS-COV proteome: Reverse vaccinology and molecular docking approach
Research Article
[키워드] AAY
antigenic
antigenicity
Antiviral
applied
approach
B-cell
binding
caused
characteristic
conserved
coronavirus
correlated
docked
Efficiency
elicit
epitope
Epitopes
examined
expression
Host
IFN-γ
immunogenic potential
immunogenic profile
in-silico
Infection
Infection prevention
Isolation
linker
mechanism
membrane
MERS-CoV
MERS-CoV infection
MERS-CoV vaccine
Middle East
molecular docking
mortality rate
multi
multiepitope vaccine
N-terminal
non-homologous
non-structural protein
ORF1a
ORF3
ORF8
positive
receptor
Region
RNA virus
Saudi Arabia
selected
selected epitope
Seven
single-stranded
South Korea
structural protein
subunit
syndrome
T-cell
T-cell responses
the vaccine
tlr-3
Toll-like receptor 3
Treatment
unique
Vaccine
Viral protein
were recorded
β-defensin
[DOI] 10.1371/journal.pone.0245072 PMC 바로가기 [Article Type] Research Article
[DOI] 10.1371/journal.pone.0245072 PMC 바로가기 [Article Type] Research Article
Intra-Host Diversity of SARS-Cov-2 Should Not Be Neglected: Case of the State of Victoria, Australia
Article
[키워드] acute respiratory syndrome
Analysis
changed
changes in
collected
coronavirus
COVID-19 pandemic
dataset
determine
Diversity
effort
epidemiological
Epidemiology
etiological agent
Evidence
Factor
Genes
Genetic
genetic bottleneck
genomic sequence
glycoprotein
greater
highlighting
Host
Intra-host diversity
Intra-host variant
iSNVs
less
lineages
magnitude
MONITOR
N genes
Next-generation sequencing
NGS
nonsynonymous
nonsynonymous iSNVs
nonsynonymous variant
ORF1a
ORF1b
pathogen
phylodynamic
Phylogenetic
Quasispecies
quasispecy
real time
RNA virus
SARS-CoV-2
SARS-CoV-2 gene
single-nucleotide
state
Transmission
variant
Victoria
virus
[DOI] 10.3390/v13010133 PMC 바로가기 [Article Type] Article
[DOI] 10.3390/v13010133 PMC 바로가기 [Article Type] Article
Pervasive generation of non-canonical subgenomic RNAs by SARS-CoV-2
SARS-CoV-2에 의한 비정규 서브게놈 RNA의 광범위한 생성
Research
[키워드] 3′ end
5′ UTR
abundance
accessory protein
addition
analysis
approaches
canonical
canonical sgRNA
canonical sgRNAs
caused
Cell culture
condition
Consistency
Coordinate
coronavirus disease
Coronavirus disease 2019
Coverage
COVID-19
determine
Direct RNA sequencing
eight
Evidence
family Coronaviridae
FIVE
generate
Genome
highlight
homology
Host
identify
in viral
increase in
independent
Infection
information
Integrative analysis
junction
landscape
leader sequence
make up
nc-sgRNA
nc-sgRNAs
non-canonical sgRNA
non-canonical sgRNAs
non-canonical subgenomic RNA
offer
open reading frames
ORF
ORF1a
ORFs
positive-sense RNA virus
Region
reported
Result
RNA
RNA virus
SARS-CoV-2
SARS-CoV-2 biology
SARS-CoV-2 genome
SARS-CoV-2 pathogenesis
SARS-CoV-2 RNA
SARS-CoV-2 sgRNA
SARS-CoV-2 sgRNAs
SARS-CoV-2 transcriptome
SARS-CoV-2 transcriptomes
sequence
sequences
Sequencing
Seven
sgRNA
sgRNAs
subgenomic RNA
subgenomic RNAs
supplementary material
the SARS-CoV-2 genome
Transcription
transcriptional activity
transcriptional regulatory sequence
transcriptional regulatory sequences
transcriptomes
TRS
TRS-B
TRS-L
Viral
viral isolate
viral isolates
viral RNAs
was used
worldwide pandemic
[DOI] 10.1186/s13073-020-00802-w PMC 바로가기 [Article Type] Research
[DOI] 10.1186/s13073-020-00802-w PMC 바로가기 [Article Type] Research
Translation-Associated Mutational U-Pressure in the First ORF of SARS-CoV-2 and Other Coronaviruses
Microbiology
[키워드] amino acid substitutions
Analysis
caused
coronavirus
Coronavirus infections
Coronaviruses
COVID-19
COVID-19 pandemic
cytosine
cytosine deamination
Deamination
degenerate
Efficiency
genomic RNA
globe
implication
investigated
knowledge
MERS
mutational pressure
Non-synonymous
nucleotide
nucleotide mutation
nucleotide mutations
observation
ORF
ORF1a
ORF1ab
ORF1b
Other
question
Replication
residue
RNA
SARS
SARS-CoV-2
sequence
significantly higher
synonymous
translated
translation
treating COVID-19
uracil
Vaccine
Viral RNA
virus
Wuhan strain
[DOI] 10.3389/fmicb.2020.559165 PMC 바로가기 [Article Type] Microbiology
[DOI] 10.3389/fmicb.2020.559165 PMC 바로가기 [Article Type] Microbiology
Emerging of a SARS-CoV-2 viral strain with a deletion in nsp1
Research
[키워드] addition
Affect
Amino acid
amino acid residue
Analysis
Asymptomatic
betacoronaviruses
C-terminal
changes
changes in
China
COVID-19
Deletion
Effects
experiment
expression
Gene Expression
Genome
genome sequence
genomic
genomic region
geographical areas
GISAID database
global pandemic
I-TASSER
in viral
in vitro
indicate
innate immune system
Interaction
interferon-alpha
involved
MAFFT
mechanism
MERS-CoV
Mutagenesis
non-structural protein
non-structural proteins
nsp1
nucleotide
ORF1a
ORF1ab
overlapping
pathogenic
Patient
pauci-symptomatic
polyproteins
previous study
Protein
reduction
Regulation
Replication
reported
respiratory
responsible
Result
SARS-CoV
SARS-CoV-2
SARS-CoV-2 genome sequences
SARS-CoV-2 viral
strain
subjects
viral adaptation
viral pathogenicity
viral replication
viral strain
was performed
Wuhan
[DOI] 10.1186/s12967-020-02507-5 PMC 바로가기 [Article Type] Research
[DOI] 10.1186/s12967-020-02507-5 PMC 바로가기 [Article Type] Research
Characterization of accessory genes in coronavirus genomes
Research
[키워드] accessory gene
Accessory genes
accessory protein
accessory proteins
Analysis
annotations
applied
bioinformatics
caused
characterization
characterized
Circular code motifs
classical
coding
contribute
coronavirus
coronavirus genome
CoV
CoV genome
COVID-19
Evidence
Frame
functional
Genome
genomes
help
hosts
Infection
less
motif
novel
Open reading frame
ORF
ORF prediction
ORF10
ORF1a
ORF1ab
ORF3b
ORFs
overlapping
Pathogenesis
polyprotein
predict
predicted
Protein
provide
Result
SARS coronaviruses
SARS-CoV
SARS-CoV-2
SARS-like virus
sequence
structural protein
targets
the SARS-CoV-2
the SARS-CoV-2 virus
the Spike
viral genes
virus genomes
virus replication
[DOI] 10.1186/s12985-020-01402-1 PMC 바로가기 [Article Type] Research
[DOI] 10.1186/s12985-020-01402-1 PMC 바로가기 [Article Type] Research
Biological, clinical and epidemiological features of COVID-19, SARS and MERS and AutoDock simulation of ACE2
Scoping Review
[키워드] ACE2
acute respiratory distress
acute respiratory syndrome
addition
Antiviral treatment
ARDS
AutoDock
basic reproduction number
Biological
caused
Characteristics
Chinese
Chloroquine
clinical feature
clinical symptom
Clinical treatment
coding
coronavirus
coronavirus
coronavirus disease
Coronaviruses
cough
COVID-19
database
Diagnosis
drugs targeting
ECMO
Efficiency
epidemiological
extracorporeal membrane oxygenation
fatigue
feature
Fever
Guidance
include
infected patients
Infection
Lower respiratory tract
measure
MERS
MERS-CoV
Middle East
myalgia
ORF1a
outbreak
outcomes
Oxygen therapy
Patient
plasma therapy
Population
receptor
Remdesivir
Research
researcher
Result
SARS
SARS-CoV
SARS-CoV-2
searched
sequence
severity
similarity
Spread
Support
Supportive treatment
susceptible
symptoms of COVID-19
syndrome
this new coronavirus
Transmission
Treatment
unique
virus
virus
[DOI] 10.1186/s40249-020-00691-6 PMC 바로가기 [Article Type] Scoping Review
[DOI] 10.1186/s40249-020-00691-6 PMC 바로가기 [Article Type] Scoping Review