Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infectionarticle Published on 2023-01-272024-09-05 Journal: Cell Reports Medicine [Category] update2024, [키워드] chronic infection COVID-19 vaccines Epidemiology Genomic surveillance immunocompromised individual intrahost evolution intrahost genotypes mutation dynamics SARS-CoV-2 variant emergence [DOI] 10.1016/j.xcrm.2023.100943 PMC 바로가기 [Article Type] article
The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual informationPathogens and Epidemiology Published on 2023-01-232024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] contextual data data management Genomic surveillance harmonization Metadata [DOI] 10.1099/mgen.0.000908 PMC 바로가기 [Article Type] Pathogens and Epidemiology
Clinical and epidemiological aspects of Delta and Gamma SARS-CoV-2 variant of concern from the western Brazilian Amazonarticle Published on 2023-01-202024-09-05 Journal: WHO Chron [Category] update2024, [키워드] Delta Gamma Genomic surveillance SARS CoV-2 variant of concern [DOI] 10.1590/0074-02760220155 PMC 바로가기 [Article Type] article
Global SARS-CoV-2 genomic surveillance: What we have learned (so far)Article Published on 2023-01-182024-09-05 Journal: Infection, genetics and evolution : journal of mol [Category] update2024, [키워드] Epidemic-pandemic preparedness Genomic surveillance SARS-CoV-2 viral evolution [DOI] 10.1016/j.meegid.2023.105405 PMC 바로가기 [Article Type] Article
Strategies to tackle SARS-CoV-2 Mu, a newly classified variant of interest likely to resist currently available COVID-19 vaccines현재 사용 가능한 COVID-19 백신에 저항할 가능성이 있는 새로 분류된 관심 변종인 SARS-CoV-2 Mu에 대처하기 위한 전략Article Published on 2022-12-312022-09-11 Journal: Human vaccines & immunotherapeutics [Category] COVID19(2023년), MERS, SARS, 변종, 유전자 메커니즘, 진단, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 administration adopted approach B.1 lineage B.1.621 BNT161b2 booster dose Characteristics coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 COVID-19 vaccine COVID-19 vaccine development Evidence exacerbated Genetic genomic Genomic surveillance global mass vaccination Health implementation infections Intervention Lineage mass vaccination Mu variant mutations Neutralizing non-pharmaceutical interventions (NPIs) NPIs potential risk public health measure public health measures Recombination reported required respiratory restrict SARS-CoV-2 SARS-CoV-2 B.1.621 SARS-CoV-2 virus sera shown Strains Strategy sub-lineage B.1.621.1 Surveillance survivor the SARS-CoV-2 virus therapeutic threat vaccination Vaccine Vaccine breakthrough Vaccine development variant variants [DOI] 10.1080/21645515.2022.2027197 PMC 바로가기 [Article Type] Article
Prevalence of SARS-CoV-2 and co-infection with malaria during the first wave of the pandemic (the Burkina Faso case)대유행의 첫 번째 물결 동안 SARS-CoV-2의 유병률 및 말라리아 동시 감염(부르키나파소 사례)Article Published on 2022-12-122023-07-11 Journal: Frontiers in Public Health [Category] COVID19(2023년), 말라리아, [키워드] co-occurrence COVID-19 Genomic surveillance Plasmodium falciparum Seroprevalence Western Africa [DOI] 10.3389/fpubh.2022.1048404 PMC 바로가기
ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 GenomesArticle Published on 2022-12-052023-07-11 Journal: Viruses [Category] COVID19(2023년), [키워드] COVID-19 Evolution Genomic surveillance Mutation SARS-CoV-2 ViralVar webtool. [DOI] 10.3390/v14122714 PMC 바로가기
SARS-CoV-2 Omicron BA.1, BA.2, and XAG identification during routine surveillance on a university campus in Belo Horizonte, Brazil, 2022Article Published on 2022-12-012023-07-10 Journal: Brazilian journal of microbiology : [publication o [Category] COVID19(2023년), [키워드] Genomic surveillance Phylogeny recombinant variant variants of concern viral evolution [DOI] 10.1007/s42770-022-00848-5 PMC 바로가기
Clinical outcomes associated with Mu variant infection during the third epidemic peak of COVID-19 in ColombiaArticle Published on 2022-12-012023-07-10 Journal: International Journal of Infectious Diseases [Category] COVID19(2023년), [키워드] Clinical outcome Comorbidities COVID-19 Genomic surveillance Lineage SARS-CoV-2 [DOI] 10.1016/j.ijid.2022.10.028 PMC 바로가기
One health genomic surveillance and response to a university-based outbreak of the SARS-CoV-2 Delta AY.25 lineage, Arizona, 2021Article Published on 2022-10-312022-11-16 Journal: PLoS ONE [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] analyses clade Clinical data clone collected Community conducted contributed defined Delta Evidence facilitate Genome genomic genomic data Genomic surveillance Health identify infectious disease outbreak Lineage local public health Mutation new SARS-CoV-2 occurred one health outbreak Phylogenetic analysis positive provided public health RT-qPCR SARS-CoV-2 SARS-CoV-2 genome secondary transmission sequenced single mutation Spread spread of COVID-19 subsequent subset Surveillance targeted interventions the SARS-CoV-2 through contact variant variants was tested wastewater were used [DOI] 10.1371/journal.pone.0272830 PMC 바로가기