Tracing the international arrivals of SARS-CoV-2 Omicron variants after Aotearoa New Zealand reopened its borderArticle Published on 2022-10-292022-11-16 Journal: Nature Communications [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] Community explained genomes Genomic surveillance growth advantage Infection International lineages New omicron onward transmission Outbreaks provide SARS-CoV-2 SARS-CoV-2 lineage significant level tracing Transmission Travel triggered variant [DOI] 10.1038/s41467-022-34186-9 PMC 바로가기
Two Years of Genomic Surveillance in Belgium during the SARS-CoV-2 Pandemic to Attain Country-Wide Coverage and Monitor the Introduction and Spread of Emerging VariantsArticle Published on 2022-10-202022-11-15 Journal: Viruses [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, 진단, [키워드] Belgium country COVID-19 effort genomic genomic sequencing Genomic surveillance intensity Laboratory Lineage Next-generation sequencing performed Quality control Research SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 genomic surveillance Surveillance the SARS-CoV-2 variant variants of concern Year [DOI] 10.3390/v14102301 PMC 바로가기
Guiding the design of SARS-CoV-2 genomic surveillance by estimating the resolution of outbreak detectionArticle Published on 2022-10-052022-11-15 Journal: Frontiers in Public Health [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] approach Cluster Clustering delta variant detect Epidemiology Genetic genomic Genomic surveillance Guiding incidence index case Infection less measure MONITOR New new virus outbreak outbreak detection Outbreaks pathogen pathogen genomics proportion public health recommendation reduced resources SARS-CoV-2 SARS-CoV-2 genomic surveillance sequence sequenced Sequencing similarity South Surveillance the SARS-CoV-2 variants whole genome [DOI] 10.3389/fpubh.2022.1004201 PMC 바로가기
Molecular characterization and sequecing analysis of SARS-CoV-2 genome in Minas Gerais, BrazilArticle Published on 2022-10-012023-07-10 Journal: Biologicals : journal of the International Associa [Category] COVID19(2023년), [키워드] B.1 lineage COVID-19 Genome sequencing Genomic surveillance Minas Gerais SARS-CoV-2 [DOI] 10.1016/j.biologicals.2022.08.001 PMC 바로가기
Genomic surveillance of the Lambda SARS-CoV-2 variant in a global phylogenetic context글로벌 계통 발생학적 맥락에서 Lambda SARS-CoV-2 변이체의 게놈 감시Article Published on 2022-10-012022-09-11 Journal: Journal of medical virology [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Analysis carried clade coronavirus country detect determine downloaded Endemic epidemiologically Europe genomic Genomic surveillance GISAID GISAID database identify isolate Lambda Lineage Local local outbreak local outbreaks North America occurred Pandemics past Phylogenetic Phylogenetic analysis Phylogenetic relationship prevalent SARS-CoV-2 SARS-CoV-2 variant sequence Sequencing severe acute respiratory syndrome Coronavirus South America spike spike mutation spike mutations Spread Surveillance variant variants of concern virus [DOI] 10.1002/jmv.27889 PMC 바로가기 [Article Type] Article
Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021Article Published on 2022-10-012022-11-16 Journal: Eurosurveillance [Category] COVID19(2023년), SARS, 유전자 메커니즘, 치료기술, [키워드] circulating Cluster community transmission complex Contact Contact tracing contribute dataset deep backward contact tracing defined downstream epidemiologically Epidemiology European event Evidence genomic Genomic surveillance Germany High-resolution independent Infection infections Nanopore real-time sequencing next generation sequencing onward transmission Phylogenetic analysis provided reveal SARS-CoV-2 SARS-CoV-2 genome SARS-COV-2 infection SARS-CoV-2 infections SARS-CoV-2 isolate SARS-CoV-2 transmission shown Spain Surveillance Transmission travel-associated SARS-CoV-2 infections. viral genome viral strain [DOI] 10.2807/1560-7917.ES.2022.27.43.2101089 PMC 바로가기
Genomic diversity of SARS-CoV-2 in Pakistan during the fourth wave of pandemic전염병의 네 번째 물결 동안 파키스탄에서 SARS-CoV-2의 게놈 다양성Article Published on 2022-10-012022-09-11 Journal: Journal of medical virology [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] A222V acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 affected Alpha B.1.617.2 Beta variant characteristic circulating circulation conducted coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 D950N delta variant Delta variants exhibited followed by G142D genomic Genomic surveillance Germany globe highlight Illumina isolate isolates Karachi L452R lineages P681R Pakistan pandemic Patient Phylogenetic analysis SARS-CoV-2 SARS-CoV-2 strain severe acute respiratory syndrome Coronavirus Singapore spike mutation T19R T478K United Kingdom V483A variant variants variants of concern whole-genome sequencing [DOI] 10.1002/jmv.27957 PMC 바로가기 [Article Type] Article
SARS-CoV-2 variant trends in Ireland: Wastewater-based epidemiology and clinical surveillance아일랜드의 SARS-CoV-2 변종 경향: 폐수 기반 역학 및 임상 감시Article Published on 2022-09-102022-09-11 Journal: The Science of the total environment [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] Alpha Alpha variant average circulating circulating variant circulating variants clinical clinical sample clinical samples collected Community complement conducted confirmed case confirmed cases correlated COVID-19 case COVID-19 disease Delta delta variant demonstrated determine Digital digital PCR disease Effectiveness Epidemiology Genome Genomic surveillance greater highlight identify Infection Ireland MONITOR National notification offer Prevalence prevalence of COVID-19 quantification RNA RNA concentration SARS-CoV-2 SARS-COV-2 infection SARS-CoV-2 infections SARS-CoV-2 lineage SARS-CoV-2 N1 SARS-CoV-2 variant sequence sequenced Sequencing significantly Spread Surveillance Validity variant variants variants of concern Viral RNA VOCs wastewater wastewater surveillance [DOI] 10.1016/j.scitotenv.2022.155828 PMC 바로가기 [Article Type] Article
Tracing the trajectories of SARS-CoV-2 variants of concern between December 2020 and September 2021 in the Canary Islands (Spain)Article Published on 2022-09-092022-11-16 Journal: Frontiers in Cellular and Infection Microbiology [Category] SARS, 변종, [키워드] acute respiratory syndrome B.1.1.7 B.1.351 B.1.617.2 Beta Canary Canary Island Canary Islands collected coronavirus COVID-19 Delta dissect distribution effort epidemic wave Europe explain Gamma genomic Genomic surveillance helping heterogeneous Outbreaks pandemic public health respiratory sample responsible SARS-CoV-2 SARS-CoV-2 variant sequenced Spain Spread Surveillance the SARS-CoV-2 tracing trajectory variants of concern variants of concern tracking. viral genome VoC VOCs [DOI] 10.3389/fcimb.2022.919346 PMC 바로가기
Genomic surveillance of SARS-CoV-2 Omicron variants on a university campusArticle Published on 2022-09-062022-11-15 Journal: Nature Communications [Category] SARS, 변종, 유전자 메커니즘, 진단, [키워드] conducted Cycle threshold value Delta delta variant demonstrated Genome genomic Genomic surveillance greater individual Mask mandates Measures median novel omicron pandemic positive predominant Public health responses reproductive SARS-CoV-2 sequenced Sequencing surveillance data symptomatic infection tested the SARS-CoV-2 university vaccination variant viral strain whole genome [DOI] 10.1038/s41467-022-32786-z PMC 바로가기