genetic diversity – Page 8 – Communicable Diseases Research

SARS-CoV-2 host prediction based on virus-host genetic features

바이러스 숙주 유전적 특징을 기반으로 한 SARS-CoV-2 숙주 예측

Article

Published on 2022-03-172022-09-11
Journal: Scientific Reports [Category] SARS, 유전자 메커니즘,

Whole genome sequence analysis showing unique SARS-CoV-2 lineages of B.1.524 and AU.2 in Malaysia

말레이시아에서 B.1.524 및 AU.2의 독특한 SARS-COV-2 계통을 보여주는 전체 게놈 서열 분석

Research Article

Published on 2022-02-252022-09-10
Journal: PLoS ONE [Category] COVID19(2023년), MERS, SARS, 변종, 진단,

[키워드] age Analysis analyzed approach association caused characterized China circulating clade country COVID-19 COVID-19 case COVID-19 cases D614G variant D614G variants dispersion dominant lineage Evolution Gender genetic diversity genome sequence GISAID Lineage lineages Malaysia Missense mutation nasopharyngeal NCBI oropharyngeal swab pandemic Phylogenetic analysis positive Prevalence real-time RT-PCR reported responsible RT-PCR SARS-CoV-2 SARS-CoV-2 evolution SARS-CoV-2 genome sequence SARS-CoV-2 genome sequences SARS-CoV-2 isolate SARS-CoV-2 isolates SARS-CoV-2 lineage scarcity selected sequence sequenced spike Spike protein Spread statistical analysis submitted sustained the SARS-CoV-2 the spike protein transmembrane domain unique virus WGS
[DOI] 10.1371/journal.pone.0263678 PMC 바로가기 [Article Type] Research Article

Genetic diversity of Plasmodium falciparum AMA-1 antigen from the Northeast Indian state of Tripura and comparison with global sequences: implications for vaccine development

인도 북동부 트리푸라 주의 Plasmodium falciparum AMA-1 항원의 유전적 다양성과 전 세계 서열과의 비교: 백신 개발에 대한 시사점

Research

Published on 2022-02-222024-08-08
Journal: Malaria Journal [Category] 말라리아,

[키워드] Apical Membrane Antigen 1 (AMA-1) genetic diversity northeast india Plasmodium falciparum Tripura
[DOI] 10.1186/s12936-022-04081-1 PMC 바로가기 [Article Type] Research

Population Genomics Approaches for Genetic Characterization of SARS-CoV-2 Lineages

Medicine

Published on 2022-02-212022-10-31
Journal: Frontiers in Medicine [Category] COVID-19,

[키워드] analyzed approach approaches assist can be used cause characterization consensus sequence coronavirus coronavirus disease COVID-19 COVID-19 pandemic datasets depth analysis Evolution facilitate genetic diversity genetics Genome genomic genomic variation Genomics GISAID database Haplotype Haplotype network Health highlight Human humans Infection Lineage lineage annotation mutations Organisms pathogen pathway PCA Phylogenetic Population population genomics pre-vaccination principal component analysis provide respiratory SARS-CoV-2 sequenced Surveillance Tajima utility variant Variant detection variants of concern Viral genome sequencing Viral surveillance virus
[DOI] 10.3389/fmed.2022.826746 PMC 바로가기 [Article Type] Medicine

Genomic Diversity of SARS-CoV-2 in Algeria and North African Countries: What We Know So Far and What We Expect?

Article

Published on 2022-02-182022-10-29
Journal: Microorganisms [Category] COVID-19,

[키워드] addition affecting African Algeria Analysis analyzed approaches assigned B.1 B.1.1 B.1.1.7 B.1.617.2 change circulating clade coding D614G delta variant Diversity genetic diversity Genome genomic Genomic analysis Genomics GISAID GISAID database Health highlight Libya Lineage Lower Measures Morocco Mutation mutation annotation North North Africa nucleocapsid protein omicron ORF3a overcome pangolin Prevalence profile Protein Public health intervention SAR-CoV-2 SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 lineage SARS-CoV-2 variant Spread submitted Surveillance the SARS-CoV-2 the spike protein variant variants of concern Viral protein VoC Whole-genome sequence wild-type Wuhan-Hu-1
[DOI] 10.3390/microorganisms10020467 PMC 바로가기 [Article Type] Article

Genomic Surveillance of SARS-CoV-2 Lineages Indicates Early Circulation of P.1 (Gamma) Variant of Concern in Southern Brazil

SARS-CoV-2 계통의 게놈 감시는 브라질 남부에서 우려의 P.1(감마) 변이체의 조기 순환을 나타냅니다

Research Article

Published on 2022-02-162022-09-10
Journal: Microbiology Spectrum [Category] COVID19(2023년), MERS, SARS, 변종, 유전자 메커니즘, 치료기술,

A Highly Divergent Hepacivirus Identified in Domestic Ducks Further Reveals the Genetic Diversity of Hepaciviruses

Article

Published on 2022-02-112023-08-29
Journal: Viruses [Category] E형 간염,

[키워드] China Domestic duck genetic diversity novel hepacivirus
[DOI] 10.3390/v14020371 PMC 바로가기 [Article Type] Article

Pango lineage designation and assignment using SARS-CoV-2 spike gene nucleotide sequences

SARS-COV-2 스파이크 유전자 뉴클레오티드 서열을 사용한 판고 계통 지정 및 할당

Research Article

Published on 2022-02-112022-09-10
Journal: BMC Genomics [Category] COVID19(2023년), Fulltext, MERS, SARS, 변종,

Role of genetic variants and host polymorphisms on COVID‐19: From viral entrance mechanisms to immunological reactions

Review

Published on 2022-02-082022-10-04
Journal: Journal of medical virology [Category] COVID19(2023년), MERS, SARS, 변종, 유전자 메커니즘, 치료기술,

[키워드] ACE ACE2 acute respiratory syndrome Affect age antiviral immunity Care caused CD26 cells Characteristics contribute coronavirus Coronavirus disease 2019 COVID‐19 COVID‐19 Critical DBP Diabetes Mellitus disease Ethnic groups Factor Gender Genetic genetic diversity genetic factor Genetic polymorphism Genetic variant genetics geographical locations higher risk highly pathogenic Host host immunity human leukocyte antigen hypertension IFITM3 IL‐6 immunological reaction implication individual Inflammatory response involved knowledge mechanism men Mortality obesity Pathogenesis pathogenic mechanism pathogenicity pathologic processe pathologic processes polymorphism Population populations risk of death role SARS‐CoV‐2 SARS‐CoV‐2 infection SARS‐CoV‐2 serological response several gene severity susceptibility the disease TMPRSS2 variant Variation virus
[DOI] 10.1002/jmv.27615 PMC 바로가기 [Article Type] Review

Comparison of SARS-CoV-2 Evolution in Paediatric Primary Airway Epithelial Cell Cultures Compared with Vero-Derived Cell Lines

Article

Published on 2022-02-052022-10-28
Journal: Viruses [Category] COVID-19, COVID19(2023년), SARS,

[키워드] Adults age airway arising Cell Cell culture cell lines cells changes in children cleavage site co-morbidities Cohort Culture Delta dependent on driving epithelial Evidence Evolution Factor fixation Genetic genetic diversity genotypic growth highlight Host host cell factor host cells human respiratory epithelium in vitro infect isolate isolates LINE morbidity and mortality Mutation nasal passages phenotypic plasticity polybasic primary airway epithelial cells reduced remained respiratory epithelial cells resulting SARS-CoV-2 SARS-CoV-2 evolution several variant spike Strains variant Vero Vero cells viral evolution Virus evolution VoC whole-genome sequencing
[DOI] 10.3390/v14020325 PMC 바로가기 [Article Type] Article