Circulation of an Artemisinin-Resistant Malaria Lineage in a Traveler Returning from East Africa to FranceArticle Published on 2022-09-302024-08-28 Journal: Clinical infectious diseases : an official publication of the Infectious [Category] 말라리아, [키워드] Artemisinin resistance East Africa Kelch13 Plasmodium falciparum whole-genome sequencing
A GPU-accelerated compute framework for pathogen genomic variant identification to aid genomic epidemiology of infectious disease: a malaria case study전염병의 게놈 역학을 지원하기 위한 병원체 게놈 변이체 식별을 위한 GPU 가속 컴퓨팅 프레임워크: 말라리아 사례 연구Article Published on 2022-09-202022-11-16 Journal: Briefings in Bioinformatics [Category] 말라리아, 변종, 유전자 메커니즘, [키워드] accelerated Accuracy COVID-19 pandemic dataset demonstrated disease Diseases effort epidemiological Epidemiology genomes genomic genomic data GPU malaria pathogen pathogen genomics Plasmodium falciparum malaria reduced reproducibility sequence SNPs Surveillance transmission pattern variant Variant calling whole-genome sequencing [DOI] 10.1093/bib/bbac314 PMC 바로가기
Monkeypox Virus Infections in Southern Italy: Is There a Risk for Community Spread?Article Published on 2022-09-172023-06-09 Journal: International Journal of Environmental Research an [Category] Fulltext, 원숭이두창, [키워드] Epidemiology Monkeypox virus southern Italy Surveillance whole-genome sequencing [DOI] 10.3390/ijerph191811719 PMC 바로가기
An Examination of SARS-CoV-2 Transmission Based on Classroom Distancing in Schools With Other Preventive Measures in Place-Missouri, January-March 20212021년 1월-3월 미주리 주에서 다른 예방 조치가 있는 학교의 교실 거리를 기반으로 한 SARS-CoV-2 전파 조사Article Published on 2022-09-012022-09-11 Journal: Public health reports (Washington, D.C. : 1974) [Category] COVID19(2023년), SARS, 변종, [키워드] analyzed classroom close contact conducted Contact COVID-19 COVID-19 pandemic Delta delta variant evaluate evaluated event events examination GRADE K-12 mapped measure occurred Other people with COVID-19 physical physical distancing potential transmission Prevalence Prevention strategy Safe SARS-CoV-2 SARS-CoV-2 transmission School school health Schools students Support symptomatic tested Transmission variant Ventilation whole-genome sequencing widespread with COVID-19 [DOI] 10.1177/00333549221109003 PMC 바로가기 [Article Type] Article
Genomic evidence of co-identification with Omicron and Delta SARS-CoV-2 variants: a report of two casesArticle Published on 2022-09-012022-11-16 Journal: International Journal of Infectious Diseases [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] acute respiratory syndrome assigned B.1.1.529 Co-infection coronavirus COVID-19 Delta Evidence Lineage omicron reported SARS-CoV-2 SARS-CoV-2 co-infection SARS-CoV-2 variants Sequencing South Africa variant variants whole-genome sequencing World Health Organization [DOI] 10.1016/j.ijid.2022.05.043 PMC 바로가기
Infection with SARS-CoV-2 Omicron Variant 24 Days after Non-Omicron Infection, Pennsylvania, USAArticle Published on 2022-09-012022-11-16 Journal: Emerging Infectious Diseases [Category] SARS, 변종, [키워드] acute respiratory syndrome coronavirus coronavirus disease COVID-19 COVID-19 vaccination Day first positive omicron Pennsylvania respiratory infections SARS-CoV-2 SARS-CoV-2 test severe acute respiratory syndrome coronavirus 2 suggested symptomatic infection symptomatic SARS-CoV-2 infection United States USA vaccine-preventable diseases variant viruses whole-genome sequencing zoonoses [DOI] 10.3201/eid2809.220539 PMC 바로가기
Sequencing and mutations analysis of the first recorded SARS-CoV-2 Omicron variant during the fourth wave of pandemic in IraqArticle Published on 2022-09-012022-11-15 Journal: The Brazilian journal of infectious diseases : an [Category] SARS, 변종, 진단, [키워드] Analysis combating conducted coronavirus disease country COVID-19 epitope GISAID database globe Illumina Immune escape immunogenic initial Iraq molecular mutated Mutation Next-generation sequencing omicron Omicron variant pandemic performed provide Receptor binding domain recorded reference sequence representing retrieved SARS-CoV-2 sequence Sequence analysis sequenced spike glycoprotein the SARS-CoV-2 virus vaccination Vaccine Vaccine development variant variant of concern was performed whole-genome sequencing [DOI] 10.1016/j.bjid.2022.102677 PMC 바로가기
Whole-genome sequencing of SARS-CoV-2 reveals diverse mutations in circulating Alpha and Delta variants during the first, second, and third waves of COVID-19 in South Kivu, east of the Democratic Republic of the CongoResearch article Published on 2022-09-012022-10-05 Journal: International Journal of Infectious Diseases [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] A.23.1 Analysis B.1.351 B.1.617.2 circulating circulation coding sequence consensus genome COVID-19 D614G Delta delta variant Diagnosis disease severity dominant Genes Genetic evolution Genetic variation genome coverage genomic global pandemic highlight identify include information isolate Lineage management mapped molecular MOST Mutation nucleocapsid protein objective ORF1ab ORF3 outbreak Oxford P.1 pandemic pangolin Phylogenetic analysis Point mutation processed reference genome responsible Result reveal SARS-CoV-2 SARS-CoV-2 isolate sequence sequenced Sequencing Seven South South Kivu subsequent Surveillance synonymous the SARS-CoV-2 genome Treatment variant variants were used whole-genome sequencing Wuhan [DOI] 10.1016/j.ijid.2022.05.041 [Article Type] Research article
A collaborative study to establish the national standard for SARS-CoV-2 RNA nucleic acid amplification techniques (NAAT) in TaiwanArticle Published on 2022-09-012022-11-15 Journal: Biologicals : journal of the International Associa [Category] SARS, 치료기술, [키워드] acute respiratory syndrome addition amplification assays coronavirus detect facilitate international standard International standard (IS) Laboratory NAAT National National standard (NS) nucleic acid amplification Nucleic acid amplification techniques (NAAT) PCR provided RNA copy numbers SARS-CoV-2 SARS-CoV-2 RNA severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Standardization Taiwan the SARS-CoV-2 virus genome whole-genome sequencing [DOI] 10.1016/j.biologicals.2022.08.002 PMC 바로가기
Accuracy of Allplex SARS-CoV-2 assay amplification curve analysis for the detection of SARS-CoV-2 variant AlphaSARS-CoV-2 변이체 Alpha 검출을 위한 Allplex SARS-CoV-2 assay 증폭 곡선 분석의 정확도Multicenter Study Published on 2022-09-012022-09-11 Journal: Future Microbiology [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] Accuracy Alpha amplification curve Analysis B.1.1.7 evaluate help material multicenter Population positive prospective cohort qPCR resources SARS-CoV-2 SARS-CoV-2 variant Seegene SARS-CoV-2 assay Slovenia specificity specimen variant variant of concern whole-genome sequencing [DOI] 10.2217/fmb-2021-0288 PMC 바로가기 [Article Type] Multicenter Study