The diagnosis and molecular epidemiology investigation of avian hepatitis E in Shandong province, ChinaResearch Published on 2022-01-252023-05-23 Journal: BMC veterinary research [Category] E형 간염, Fulltext, [키워드] Avian hepatitis E virus mixed infections Molecular epidemiology Potential novel genotype [DOI] 10.1186/s12917-021-03079-2 PMC 바로가기 [Article Type] Research
Distinct mutations and lineages of SARS‐CoV‐2 virus in the early phase of COVID‐19 pandemic and subsequent 1‐year global expansionResearch Article Published on 2022-01-182022-10-04 Journal: Journal of medical virology [Category] COVID19(2023년), MERS, SARS, 변종, [키워드] accumulating Accuracy approach caused Combination COVID‐19 death descendant distribution dominant early phase Effectiveness Efficacy Europe evaluate FIVE Genome genomic Genotype help Hierarchical Infection initial Lineage Measures molecular Molecular diagnosis Molecular epidemiology MONITOR Mutation mutational spectrum new strain Novel coronavirus occurred outbreak pandemic Patient Phylogenetic analysis provide real time reduce reference genome Replication SARS‐CoV‐2 SARS‐CoV‐2 genome SARS‐CoV‐2 virus SARS‐CoV‐2 Seafood sequenced specific mutation Spread subsequent Transmission transmission route unique Vaccine variants of concern viral genome viral genomes VoC Wuhan Wuhan, China [DOI] 10.1002/jmv.27580 PMC 바로가기 [Article Type] Research Article
Genomic monitoring of the SARS-CoV-2 B1.1.7 (WHO VOC Alpha) in the Sao Paulo state, Brazil브라질 상파울루주 SARS-CoV-2 B1.1.7(WHO VOC Alpha) 게놈 모니터링Article Published on 2022-01-152022-09-11 Journal: Virus research [Category] SARS, 변종, 유전자 메커니즘, [키워드] Alpha Alpha VOC B.1.1.7 Brazil circulation city Cluster country described dominant lineage Europe Evidence Genome genomic Genomic surveillance highlight independent Lineage Lineage B.1.1.7 molecular Molecular epidemiology Multiple studies multiple study network occurred performed Phylogenetic analysis Real-time monitoring São Paulo. SARS-CoV-2 SARS-CoV-2 variant SARS-CoV-2 variants state strain Surveillance the SARS-CoV-2 Transmission dynamics vaccination viral strain viral strains VoC WHO [DOI] 10.1016/j.virusres.2021.198643 PMC 바로가기 [Article Type] Article
A year living with SARS-CoV-2: an epidemiological overview of viral lineage circulation by whole-genome sequencing in Barcelona city (Catalonia, Spain)SARS-CoV-2와 함께하는 1년: 바르셀로나 시(스페인 카탈로니아)에서 전체 게놈 시퀀싱을 통한 바이러스 계통 순환의 역학 개요Coronaviruses Published on 2022-01-042022-09-10 Journal: Emerging Microbes & Infections [Category] COVID19(2023년), SARS, 변종, [키워드] age antigenic B.1.1 B.1.1.7 B.1.177 B.1.351 B.1.617.2 Barcelona Catalonia circulating circulation clinical setting Complete consensus sequence consensus sequences COVID-19 D614G mutation E484K epidemiological events Genetic genetic diversity genetic variability GISAID hospital Illumina immunological L452R Lineage lineages MiSeq Molecular epidemiology Multiple Mutation N-terminal domain P.1 pandemic predominant primary care protocol Randomly Receptor-binding domain respiratory respiratory sample S protein SARS-CoV-2 SARS-CoV-2 strain SARS-CoV-2 virus selected sequenced Spain T478K the receptor-binding domain the S protein vaccination variants viruses was performed were used WGS while whole-genome sequencing [DOI] 10.1080/22221751.2021.2011617 PMC 바로가기 [Article Type] Coronaviruses
Exploration of a new hepatitis a surveillance system in Beijing, China: based on molecular epidemiologyResearch Published on 2022-01-042023-05-23 Journal: BMC Infectious Diseases [Category] A형 간염, Fulltext, [키워드] hepatitis A virus Molecular epidemiology Surveillance transmission route [DOI] 10.1186/s12879-021-06872-4 PMC 바로가기 [Article Type] Research
Spread of multiple SARS-CoV-2 lineages April-August 2020 anticipated the second pandemic wave in Lombardy (Italy)Article Published on 2022-01-012022-11-15 Journal: Pediatric allergy and immunology : official public [Category] SARS, 변종, 치료기술, [키워드] addition amino acid change anticipated B.1 B.1.1 circulation COVID-19 disease early phase Evolution FIVE investigated Italy Lineage lockdown lombardy majority molecular Molecular epidemiology NGS novel lineage occurred pandemic promoted Region reported Result SARS-CoV-2 SARS-CoV-2 lineage SARS-CoV-2 strain Sequencing Seven spike gene sequence Spread strain the disease the receptor-binding domain the spike protein Transmission variant variants of concern virus whole genome Whole genome sequencing [DOI] 10.1111/pai.13641 PMC 바로가기
Combined epidemiological and genomic analysis of nosocomial SARS-CoV-2 infection early in the pandemic and the role of unidentified cases in transmission전염병 초기 병원 SARS-CoV-2 감염의 역학 및 게놈 통합 분석과 전염에서 미확인 사례의 역할Article Published on 2022-01-012022-09-11 Journal: Clinical microbiology and infection : the official [Category] MERS, SARS, 유전자 메커니즘, 진단, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Admission Admissions analysed Asymptomatic asymptomatic patients case ascertainment Cluster Clusters Combined Community consecutive patients coronavirus Coronavirus 2019 COVID-19 creating Diagnosis early stage early stages epidemiological epidemiological data epidemiologically Evidence evidence of Face mask Face masks facilitated Factor Final genome sequence Genomic analysis genomic data Genomics Haplotype healthcare healthcare worker Healthcare workers Healthcare-associated infection hospital implicated incidence increase infection control limit median Molecular epidemiology multisite nosocomial Nosocomial transmission pandemic per day positive PCR test respiratory SARS-CoV-2 SARS-CoV-2 genome sequence SARS-CoV-2 genome sequences SARS-COV-2 infection sequenced Sequencing severe acute respiratory syndrome Coronavirus Support Transmission transmission cluster transmission clusters vector Viral viral genome sequence whole-genome sequencing with infection [DOI] 10.1016/j.cmi.2021.07.040 PMC 바로가기 [Article Type] Article
The Molecular Characterization of Hepatitis A Virus Strains Circulating during Hepatitis A Outbreaks in São Paulo, Brazil, from September 2017 to May 2019Communication Published on 2021-12-312023-05-23 Journal: Viruses [Category] A형 간염, Fulltext, [키워드] hepatitis A virus Molecular epidemiology outbreak [DOI] 10.3390/v14010073 PMC 바로가기 [Article Type] Communication
Complete genome sequencing of SARS-CoV-2 strains: A pilot survey in Palestine reveals spike mutation H245NResearch Note Published on 2021-12-232022-10-27 Journal: BMC Research Notes [Category] COVID-19, [키워드] Analysis average China Cluster Complete genome sequence Coronavirus-2 COVID-19 genetic diversity Genetic variation Genome sequencing globe Haplotype haplotypes highest international public health majority Molecular epidemiology Mutation network analysis nucleotide objective Palestine pandemic performed Phylogenetic analysis pilot study reported Result reveal RNA virus SARS-CoV-2 SARS-CoV-2 genome sequences sequence Sequencing severe respiratory syndrome spike mutation Spike-H245N statistically significant supplementary material unique whole genome [DOI] 10.1186/s13104-021-05874-4 PMC 바로가기 [Article Type] Research Note
Complete genome sequencing of SARS-CoV-2 strains: A pilot survey in Palestine reveals spike mutation H245NResearch Note Published on 2021-12-232022-10-27 Journal: BMC Research Notes [Category] Coronavirus, COVID-19, SARS, [키워드] Analysis average China Cluster Complete genome sequence Coronavirus-2 COVID-19 genetic diversity Genetic variation Genome sequencing globe Haplotype haplotypes highest international public health majority Molecular epidemiology Mutation network analysis nucleotide objective Palestine pandemic performed Phylogenetic analysis pilot study reported Result reveal RNA virus SARS-CoV-2 SARS-CoV-2 genome sequences sequence Sequencing severe respiratory syndrome spike mutation Spike-H245N statistically significant supplementary material unique whole genome [DOI] 10.1186/s13104-021-05874-4 PMC 바로가기 [Article Type] Research Note