Predicting potential SARS-CoV-2 mutations of concern via full quantum mechanical modellingLife Sciences Published on 2024-02-072024-09-05 Journal: Journal of the Royal Society Interface [Category] update2024, [키워드] ab initio modelling Evolution protein–protein interactions quantum mechanical modelling SARS-CoV-2 Spike protein [DOI] 10.1098/rsif.2023.0614 PMC 바로가기 [Article Type] Life Sciences
In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b인간 Tmem41b를 포함하는 막횡단 단백질의 대규모 패밀리에 대한 구조 및 기능의 실리코 예측Research Article Published on 2021-03-252022-09-11 Journal: F1000Research [Category] MERS, SARS, 유전자 메커니즘, [키워드] ab initio modelling Analysis autophagy bioinformatics Bioinformatics analysis contact predictions DedA domain early stage early stages embryonic embryonic development evolutionary covariance family feature Features highlight homologue homologues Host include information involved less Local mechanism Pfam domain predicted Protein Data Bank recent rotational symmetry SARS-CoV-2 sequence Sequence analysis shown structural biology tandem repeat Tmem41b transmembrane protein Transport Viral VTT domain [DOI] 10.12688/f1000research.27676.2 PMC 바로가기 [Article Type] Research Article
Structures and dynamics of the novel S1/S2 protease cleavage site loop of the SARS-CoV-2 spike glycoproteinArticle Published on 2020-10-052022-10-30 Journal: Journal of Structural Biology: X [Category] COVID-19, [키워드] ab initio modelling abrogated Abstract cleavage site conformations coronavirus furin cleavage site glycan host cells human pathogen insertion Interaction Molecular dynamics simulation prefusion protease proteolytic cleavage regulate representing S1/S2 SARS-CoV-2 spike glycoprotein spike glycoprotein gene Structure the SARS-CoV-2 therapeutic target viral entry virulent [DOI] 10.1016/j.yjsbx.2020.100038 PMC 바로가기 [Article Type] Article