Teaching transposon classification as a means to crowd source the curation of repeat annotation – a tardigrade perspectiveResearch Published on 2024-05-062024-09-05 Journal: Mobile DNA [Category] update2024, [키워드] annotation genome assembly library manual curation Non-model organism transposable elements [DOI] 10.1186/s13100-024-00319-8 PMC 바로가기 [Article Type] Research
Automatization of CT Annotation: Combining AI Efficiency with Expert PrecisionTechnical Note Published on 2024-01-152024-09-05 Journal: Diagnostics [Category] update2024, [키워드] annotation artificial intelligence computer vision radiology Semantic segmentation [DOI] 10.3390/diagnostics14020185 PMC 바로가기 [Article Type] Technical Note
Comparative spatial proteomics of Plasmodium-infected erythrocytesArticle Published on 2023-11-282024-08-29 Journal: Cell Reports [Category] 말라리아, [키워드] annotation CP: Microbiology drug targets erythrocyte modification Evolution exportome host-pathogen interaction malaria pan-species Pathogenesis
The NIH Comparative Genomics Resource: addressing the promises and challenges of comparative genomics on human healtharticle Published on 2023-09-272024-09-05 Journal: BMC Genomics [Category] update2024, [키워드] annotation bioinformatics human health Microbiome NIH Comparative Genomics Resource (CGR) oncology Sequence contamination toxicology xenotransplantation zoonotic disease [DOI] 10.1186/s12864-023-09643-4 PMC 바로가기 [Article Type] article
Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotationsArticle Published on 2022-08-312022-11-15 Journal: Database: The Journal of Biological Databases and [Category] 진단, [키워드] accumulated annotation article automated community effort coronavirus disease COVID COVID-19 database dataset downstream eight growth help highest Interpretation manual curation MOST organized pandemic participated reported significantly submission Topic track Vaccine [DOI] 10.1093/database/baac069 PMC 바로가기
Self-evolving vision transformer for chest X-ray diagnosis through knowledge distillation Research Published on 2022-07-042022-10-05 Journal: Nature Communications [Category] 치료기술, [키워드] absence annotation applicability Chest chest X-ray clinical setting COVID-19 Diagnosis external validation hospital IMPROVE knowledge offer Radiologists robust transformer Tuberculosis [DOI] 10.1038/s41467-022-31514-x [Article Type] Research
Continuous development of the semantic search engine preVIEW: from COVID-19 to long COVID의미 검색 엔진 preVIEW의 지속적인 개발: COVID-19에서 긴 COVID까지Article Published on 2022-07-012022-09-11 Journal: Database: The Journal of Biological Databases and [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 added addition annotation annotations articles automatically Classifier Continuous coronavirus coronavirus disease COVID COVID-19 curated described disease False positives feature feedback include Infection MOST Occurrence participated peer-reviewed retrieved SARS-CoV-2 service severe acute respiratory syndrome Coronavirus Symptom true positive true positives Usability user variant virus [DOI] 10.1093/database/baac048 PMC 바로가기 [Article Type] Article
Genome sequence diversity of SARS-CoV-2 obtained from clinical samples in Uzbekistan우즈베키스탄의 임상 샘플에서 얻은 SARS-CoV-2의 게놈 서열 다양성Article Published on 2022-06-272022-09-11 Journal: PLoS ONE [Category] COVID19(2023년), SARS, 변종, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 affected Alpha Amino acid amino acid substitution annotation association change clade clades clinical isolates clinical sample Cluster coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 COVID-19 severity D614G Deleterious Deletion Delta Denmark disease severity evidenced Evolution female followed by genetic diversity Genome Genomic analysis genomic change Genotype help Identified isolate isolates male Missense Missense mutation Missense mutations Mutation Nextstrain NSP Nsp12 nsp13 Nsp3 nsp4 NSP6 nucleotide Open reading frame ORF ORF7a Pathogenesis PCR-positive patient Protein reading regions Research Russia SARS-CoV SARS-CoV-2 SARS-CoV-2 strain SARS-CoV-2 variant SARS-CoV-2 variants sequence severe acute respiratory syndrome Coronavirus severity significantly SNP SNPs subclade Substitution synonymous Tashkent the Spike two group two groups USA variant variants Variation WGS whole genome sequence with COVID-19 [DOI] 10.1371/journal.pone.0270314 PMC 바로가기 [Article Type] Article
Single trait versus principal component based association analysis for flowering related traits in pigeonpea Research Published on 2022-06-212022-10-05 Journal: Scientific Reports [Category] 유전자 메커니즘, [키워드] aligned Analysis annotation appear association Auxin binding can be used chromatin complex complex protein conducted covariate cytochrome domain Factors False positive Genes Genome GLM GWAS indicate involved loci majority marker PC1 Pin pleiotropic principal component analysis Protein Region regulate reproductive RNA methyltransferase robust Seven signaling pathway SNP statistically Transcriptome tropical unique [DOI] 10.1038/s41598-022-14568-1 [Article Type] Research
Beyond GWAS-Could Genetic Differentiation within the Allograft Rejection Pathway Shape Natural Immunity to COVID-19?GWAS를 넘어 동종이식 거부 경로 내 유전적 분화가 COVID-19에 대한 자연 면역을 형성할 수 있습니까?Article Published on 2022-06-032022-09-11 Journal: International Journal of Molecular Sciences [Category] 변종, [키워드] Allograft allograft rejection Analysis annotation antiviral immunity applied Biomarker Biomarkers chromosome chromosome 6 chromosomes clinical presentation component components COVID-19 COVID-19 infection COVID-19 infections cumulative demonstrated differentiation disease Factor Genetic genetic variants genetics Genome-wide association study genomic GWAS Health help hospitalisation Host identify immune response immune responses immune system immunisation Infection investigated KEGG KEGG pathways Linear model majority mapped metabolic pathway metabolic pathways natural nucleotide outcome pathway Pathways Patient rejection resistance risk Risk assessment self Sequencing severe COVID-19 Severe COVID-19 Infection shape single nucleotide Single nucleotide polymorphism single variant SNP SNPs susceptibility Treatment variant whole genome Whole genome sequencing [DOI] 10.3390/ijms23116272 PMC 바로가기 [Article Type] Article