Exploring the resistome, virulome, and mobilome of multidrug-resistant Klebsiella pneumoniae isolates: deciphering the molecular basis of carbapenem resistanceResearch Published on 2024-04-252024-09-05 Journal: BMC Genomics [Category] update2024, [키워드] ARGs carbapenem resistance Comparative genomics Klebsiella pneumoniae Mobilome Pakistan resistome virulome Whole genome sequencing [DOI] 10.1186/s12864-024-10139-y PMC 바로가기 [Article Type] Research
Strain heterogeneity in a non-pathogenic fungus highlights factors contributing to virulenceArticle Published on 2024-03-102024-09-05 Journal: bioRxiv [Category] update2024, [키워드] Comparative genomics Evolution of virulence fungal pathogenicity gliotoxin Secondary metabolism specialized metabolism virulence factor [DOI] 10.1101/2024.03.08.583994 PMC 바로가기 [Article Type] Article
Detecting and characterizing new endofungal bacteria in new hosts: Pandoraea sputorum and Mycetohabitans endofungorum in Rhizopus arrhizusMicrobiology Original Research Published on 2024-02-282024-09-05 Journal: Frontiers in Microbiology [Category] update2024, [키워드] Comparative genomics endohyphal bacterium novel endosymbiont Pandoraea sputorum Rhizopus oryzae [DOI] 10.3389/fmicb.2024.1346252 PMC 바로가기 [Article Type] Microbiology Original Research
Causal influences of neuropsychiatric disorders on Alzheimer’s diseaseArticle Published on 2024-02-232024-09-05 Journal: Translational Psychiatry [Category] update2024, [키워드] Comparative genomics Psychiatric disorders [DOI] 10.1038/s41398-024-02822-1 PMC 바로가기 [Article Type] Article
Genomic, transcriptomic, and phenotypic differences among archetype Shigella flexneri strains of serotypes 2a, 3a, and 6유형 2a, 3a 및 6의 원형 시겔라 플렉스네리 균주 간의 유전체, 전사체 및 표현형 차이Article Published on 2023-12-202024-08-22 Journal: mSphere [Category] 세균성이질, [키워드] Comparative genomics Shigella Shigella flexneri Shigellosis
Comparative genomics of spike, envelope, and nucleocapsid protein of severe acute respiratory syndrome coronavirus 2Article Published on 2023-09-012024-09-05 Journal: African Health Sciences [Category] update2024, [키워드] Comparative genomics COVID-19 envelope protein nucleocapsid protein pandemic SARS-CoV-2 Spike protein [DOI] 10.4314/ahs.v23i3.45 PMC 바로가기 [Article Type] Article
CamPype: an open-source workflow for automated bacterial whole-genome sequencing analysis focused on Campylobacterarticle Published on 2023-07-202024-09-05 Journal: BMC Bioinformatics [Category] update2024, [키워드] antimicrobial resistance genes Bacterial typing Comparative genomics genome analysis genome annotation Pipeline virulence genes [DOI] 10.1186/s12859-023-05414-w PMC 바로가기 [Article Type] article
HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2article Published on 2023-04-222024-09-05 Journal: Communications Biology [Category] update2024, [키워드] Comparative genomics Computational biology and bioinformatics Pathogens [DOI] 10.1038/s42003-023-04784-4 PMC 바로가기 [Article Type] article
Emergence of sulphonamide resistance in azithromycin-resistant pediatric strains of Salmonella Typhi and Paratyphi A: A genomics insightarticle Published on 2023-01-312024-09-01 Journal: Gene [Category] 살모넬라증, [키워드] antimicrobial resistance Comparative genomics pediatric Salmonella Typhi virulence factors [Article Type] article
Phylogenetic analysis and comparative genomics of SARS-CoV-2 from survivor and non-survivor COVID-19 patients in Cordoba, Argentina아르헨티나 코르도바에서 생존자와 비생존자 COVID-19 환자의 SARS-CoV-2 계통발생 분석 및 비교 유전체학Article Published on 2022-07-142022-09-11 Journal: BMC Genomics [Category] COVID19(2023년), MERS, SARS, 변종, 유전자 메커니즘, 진단, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Analysis association B.1 both groups carried Clinical characteristics Clinical outcome clinical outcomes Comorbidities Comorbidity Comparative Comparative genomics Complete Córdoba coronavirus cough COVID-19 COVID-19 disease COVID-19 pandemic COVID-19 patient COVID-19 patients Dyspnea Epidemiological study Evolution Evolution of SARS-CoV-2 Fever First wave functional Future Genes genome sequence Genome sequences genomes Genomic analysis genomic data groups Hospitalization in both groups incidence Infectious diseases Lineage majority Molecular epidemiology Mutation nasopharyngeal specimen Next-generation sequencing nine non-survivor Non-survivors Nsp3 outcomes pandemic Patient patients performed phylodynamic Prevalence Protein repertoire Research respiratory responsible SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 genomes SARS-CoV-2 mutation SARS-CoV-2 pathogenesis SARS-CoV-2 strain SARS-CoV-2 strains SARS-CoV-2 variants SARS-CoV-2 virus Sequencing severe acute respiratory syndrome Coronavirus severe acute respiratory syndrome coronavirus 2 South America Specific specific mutation specific mutations Spike protein Spread survivor Survivors Symptom Symptoms the SARS-CoV-2 the Spike variant Variation was performed [DOI] 10.1186/s12864-022-08756-6 PMC 바로가기 [Article Type] Article