Phylogenetic signatures reveal multilevel selection and fitness costs in SARS-CoV-2Research Article Published on 2024-07-242024-09-05 Journal: Wellcome Open Research [Category] update2024, [키워드] genetic clustering molecular evolution Mutation natural selection Phylogenetic analysis SARS-CoV-2 transmission fitness within-host evolution [DOI] 10.12688/wellcomeopenres.20704.2 PMC 바로가기 [Article Type] Research Article
Population genomic evidence of structured and connected Plasmodium vivax populations under host selection in Latin AmericaResearch Article Published on 2024-03-242024-09-05 Journal: Ecology and Evolution [Category] update2024, [키워드] Genomic epidemiology natural selection Parasitology phylogeography Plasmodium vivax Population dynamics [DOI] 10.1002/ece3.11103 PMC 바로가기 [Article Type] Research Article
Genetic diversity and natural selection of apical membrane antigen-1 (ama-1) in Cameroonian Plasmodium falciparum isolatesarticle Published on 2024-02-282024-09-01 Journal: Gene [Category] 말라리아, [키워드] apical membrane antigen-1 Evolution natural selection Plasmodium falciparum Population genetics Vaccine [Article Type] article
The 29-nucleotide deletion in SARS-CoV: truncated versions of ORF8 are under purifying selectionarticle Published on 2023-07-102024-09-05 Journal: BMC Genomics [Category] update2024, [키워드] Evolution Gene regulation natural selection Protein truncation Rearrangements Recombination [DOI] 10.1186/s12864-023-09482-3 PMC 바로가기 [Article Type] article
Genetic diversity and natural selection of rif gene (PF3D7_1254800) in the Plasmodium falciparum global populationsarticle Published on 2023-06-302024-09-01 Journal: Molecular and Biochemical Parasitology [Category] 말라리아, [키워드] genetic diversity natural selection Plasmodium falciparum Population structure Repetitive interspersed family (rif) variable region [Article Type] article
Natural selection of the D614G mutation in SARS-CoV-2 Omicron (B.1.1.529) variant and its subvariantsarticle Published on 2023-02-132024-09-05 Journal: Molecular Therapy. Nucleic Acids [Category] update2024, [키워드] D614G mutation natural selection omicron subvariant [DOI] 10.1016/j.omtn.2023.01.013 PMC 바로가기 [Article Type] article
Epistasis-Driven Evolution of the SARS-CoV-2 Secondary StructureArticle Published on 2022-12-012022-11-16 Journal: Journal of molecular evolution [Category] COVID19(2023년), SARS, 변종, [키워드] acute respiratory syndrome arises arising base pairs Compensatory Compensatory evolution conserved coronavirus Deleterious derived allele epistasis Evolution form Frequency functional genetic background Genome highlight Hydrogen bond Hypothesis Last Modification motif Mutation natural selection pathogenicity regulate RNA SARS-CoV-2 secondary secondary structure Secondary structure. Structure target the SARS-CoV-2 UTR viral replication [DOI] 10.1007/s00239-022-10073-1 PMC 바로가기
RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysisArticle Published on 2022-11-022022-11-16 Journal: PLoS ONE [Category] SARS, 변종, 치료기술, [키워드] acting Analysis assessment automatically COVID-19 pandemic dataset datasets detect evaluate Evolution Genome Genome sequences genomes genomic include Intensive Lineage lineages molecular Mutation natural selection Notation object pathogen Phylogenetic Rapid SARS-CoV-2 selected Selection selective sensitivity sequence Sequence analysis sequencing error Surveillance underlie unmet need variants of concern whole genes yielding [DOI] 10.1371/journal.pone.0275623 PMC 바로가기
Biophysical and Biochemical Characterization of the Receptor Binding Domain of SARS-CoV-2 VariantsArticle Published on 2022-10-012022-11-16 Journal: The protein journal [Category] COVID19(2023년), SARS, 변종, [키워드] ACE2 adopted affinity antibody biochemical characterization Degradation help host cell receptor host receptor immune response immunological IMPROVE increase in infected individual interact Intervention medical intervention mutant Mutation mutations natural selection neutralizing antibody parental protease Rapid RBD receptor Receptor binding domain responses SARS-CoV-2 SARS-CoV-2 spike protein SARS-CoV-2 variant sensitivity the RBD thermal stability Transmissibility understanding variant variants variants of concern [DOI] 10.1007/s10930-022-10073-6 PMC 바로가기
Population genetic models for the spatial spread of adaptive variants: A review in light of SARS-CoV-2 evolutionArticle Published on 2022-09-222022-11-16 Journal: PLoS Genetics [Category] SARS, 변종, [키워드] adaptive Analysis Characteristics consequence coronavirus 2 Course COVID-19 pandemic dispersal Evolution future work Genetic genetic model genetics identify Lineage mathematical natural selection pandemic Pandemics Population populations respiratory SARS-CoV-2 SARS-CoV-2 evolution Spread Travel variant variants of concern [DOI] 10.1371/journal.pgen.1010391 PMC 바로가기