Identification of Various Recombinants in a Patient Coinfected With the Different SARS‐CoV‐2 VariantsOriginal Article Published on 2024-06-182024-09-05 Journal: Influenza and Other Respiratory Viruses [Category] update2024, [키워드] Coinfection Recombination SARS‐CoV‐2 spike gene Viral quasispecies [DOI] 10.1111/irv.13340 PMC 바로가기 [Article Type] Original Article
Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnoverPathogens and Epidemiology Published on 2024-03-212024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] coinfections Genomic surveillance Mexico SARS-CoV-2 Viral quasispecies [DOI] 10.1099/mgen.0.001220 PMC 바로가기 [Article Type] Pathogens and Epidemiology
SARS-CoV-2 mutant spectra as variant of concern nurseries: endless variation?Microbiology Original Research Published on 2024-03-142024-09-05 Journal: Frontiers in Microbiology [Category] update2024, [키워드] clade-discordant residues COVID-19 ultra-deep sequencing variant of concern viral emergence Viral quasispecies [DOI] 10.3389/fmicb.2024.1358258 PMC 바로가기 [Article Type] Microbiology Original Research
Immune System Deficiencies Do Not Alter SARS-CoV-2 Evolutionary Rate but Favour the Emergence of Mutations by Extending Viral PersistenceArticle Published on 2024-03-132024-09-05 Journal: Viruses [Category] update2024, [키워드] immunocompromised subjects Intra-host SARS-CoV-2 genomic variability Viral quasispecies [DOI] 10.3390/v16030447 PMC 바로가기 [Article Type] Article
Incipient functional SARS-CoV-2 diversification identified through neural network haplotype mapsInaugural Article Published on 2024-02-282024-09-05 Journal: Proceedings of the National Academy of Sciences of [Category] update2024, [키워드] clade transition COVID-19 intrahost evolution self-organized maps Viral quasispecies [DOI] 10.1073/pnas.2317851121 PMC 바로가기 [Article Type] Inaugural Article
Atypical Mutational Spectrum of SARS-CoV-2 Replicating in the Presence of RibavirinAntiviral Agents Published on 2023-01-052024-09-05 Journal: Med Instrum [Category] update2024, [키워드] COVID-19 lethal mutagenesis ribavirin SARS-CoV-2 Viral quasispecies [DOI] 10.1128/aac.01315-22 PMC 바로가기 [Article Type] Antiviral Agents
Multiorgan and Vascular Tropism of SARS-CoV-2SARS-CoV-2의 다기관 및 혈관 친화성Case Reports Published on 2022-03-032022-09-11 Journal: Viruses [Category] SARS, 치료기술, 치료제, [키워드] active viral replication adrenal gland Affect biopsies contribute COVID-19 COVID-19 patient deep sequencing distribution favor Genetic heterogeneous highlight histological Infection Inferior vena cava Intra-host variability investigated lower respiratory system multiple tissues Mutation organ organs other tissue other tissues pancreas Post-mortem Quasispecies respiratory tract RNA transcript SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 mutation SARS-CoV-2 mutations Sequencing specimen Spike protein stomach the SARS-CoV-2 the spike protein tissue tissues tropism ultra-deep sequencing Variability vena Viral quasispecies Virological was performed [DOI] 10.3390/v14030515 PMC 바로가기 [Article Type] Case Reports
Comparative analysis of HBV basic core promoter/pre-core gene mutations and viral quasispecies diversity in HIV/HBV co-infected and HBV mono-infected patientsArticle Published on 2022-01-012023-06-12 Journal: Acta virologica [Category] B형 간염, [키워드] human immunodeficiency virus, hepatitis B virus mutations Next-generation sequencing Viral quasispecies [DOI] 10.4149/av_2022_103
Host-dependent editing of SARS-CoV-2 in COVID-19 patientsCOVID-19 환자에서 SARS-CoV-2의 호스트 의존적 편집Research Article Published on 2021-09-052022-09-10 Journal: Emerging Microbes & Infections [Category] SARS, 변종, 유전자 메커니즘, [키워드] acting ADAR1 adenosine adenosine deaminase affected Analysis antiviral role caused coronavirus disease Coronavirus disease 2019 COVID-19 COVID-19 patient editing fixed fraction frequencies Frequency genetic variability genomes Host human population Illumina infected individuals Infection investigated long-lasting mechanism mechanisms Mild MOST Mutation mutations new SARS-CoV-2 Next-generation sequencing NGS Non-synonymous Nsp12 Patient persistent infection platform predominant produced Quasispecies Replication RNA virus RNA viruses RNA-dependent RNA polymerase SARS-CoV-2 SARS-CoV-2 spike SARS-CoV-2 variants Sequencing severe disease Single nucleotide polymorphism single nucleotide polymorphisms spike gene Substitution the SARS-CoV-2 Variability variant variants Viral Viral quasispecies viral quasispecy Viremia viruses [DOI] 10.1080/22221751.2021.1969868 PMC 바로가기 [Article Type] Research Article
Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies바이러스 팬게놈에서 개별 감염 유사종에 이르는 SARS-CoV-2 돌연변이 지문 프로파일링Research Published on 2021-04-192022-09-10 Journal: Genome Medicine [Category] MERS, SARS, 변종, 진단, 치료기술, 치료제, [키워드] Analysis approach clinical samples Cohort Combination conducted conserved Contact tracing COVID-19 de novo de novo mutation de novo mutations detect feature Genetic Genetic fingerprints Genome genomic identify Infection infections k-mers landscape molecular Mutation mutations occur pandemic Patient patients performed Population Prevalence primer Primers profile Profiling Quasispecies quasispecy Region Result RNA-dependent RNA polymerases SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 genomes SARS-CoV-2 mutation sequence Sequence alignment sequenced Sequencing specific mutations strain Strains susceptible the SARS-CoV-2 Transmission utility variants Viral viral genome viral mutation Viral mutations viral pangenome Viral quasispecies viral replication viral sample viral samples viral sequences virus genomes [DOI] 10.1186/s13073-021-00882-2 PMC 바로가기 [Article Type] Research