SARS-like Coronaviruses in Horseshoe Bats ( Rhinolophus spp.) in Russia, 2020Article Published on 2022-01-092022-10-28 Journal: Viruses [Category] COVID-19, SARS, [키워드] Rhinolophus acquisition bat bat SARS-like coronaviruses Bulgaria cave coronavirus described Evidence genetic diversity greater horseshoe horseshoe bats involved Kenya Lineage oral swab ORF3 ORF6 ORF7a ORF7b Phylogenetic positive Prevalence recombination event Region related virus RT-PCR Russia SARS-CoV SARS-CoV-2 SARS-CoV-like viruses SARS-like coronavirus structural protein viral metagenomics virus viruses Zoonotic viruses [DOI] 10.3390/v14010113 PMC 바로가기 [Article Type] Article
A Pre-Vaccination Baseline of SARS-CoV-2 Genetic Surveillance and Diversity in the United StatesSARS-COV-2 유전자 감시 및 미국의 다양성의 예방 접종 기준Article Published on 2022-01-072022-09-10 Journal: Viruses [Category] SARS, 변종, 치료기술, 치료제, [키워드] Administered Amino acid amino acid change amino acid changes Analysis conducted COVID-19 COVID-19 vaccine COVID-19 vaccines distributions Diversity expected frequencies Frequency Genetic genetic diversity geographical distributions immune pressure immunologically Infection linkage measure naïve Pathogens pre-vaccination remained RNA virus SARS-CoV-2 SARS-CoV-2 evolution SARS-CoV-2 in United States shifting Spread Support Surveillance the United State uniformity United States variants of concern Viral viral evolution virus spread VOCs widespread [DOI] 10.3390/v14010104 PMC 바로가기 [Article Type] Article
Genetic Diversity and Selection of Plasmodium vivax Apical Membrane Antigen-1 in China–Myanmar Border of Yunnan Province, China, 2009–2016중국 윈난성 중국-미얀마 국경에서의 2009-2016년 플라스모디움 비박스 정점 막 항원-1의 유전적 다양성과 선택Original Research Published on 2022-01-052024-08-08 Journal: Frontiers in Cellular and Infection Microbiology [Category] 말라리아, [키워드] apical membrane antigen-1 China–Myanmar border area genetic diversity Plasmodium vivax Positive selection Vaccine [DOI] 10.3389/fcimb.2021.742189 PMC 바로가기 [Article Type] Original Research
A year living with SARS-CoV-2: an epidemiological overview of viral lineage circulation by whole-genome sequencing in Barcelona city (Catalonia, Spain)SARS-CoV-2와 함께하는 1년: 바르셀로나 시(스페인 카탈로니아)에서 전체 게놈 시퀀싱을 통한 바이러스 계통 순환의 역학 개요Coronaviruses Published on 2022-01-042022-09-10 Journal: Emerging Microbes & Infections [Category] COVID19(2023년), SARS, 변종, [키워드] age antigenic B.1.1 B.1.1.7 B.1.177 B.1.351 B.1.617.2 Barcelona Catalonia circulating circulation clinical setting Complete consensus sequence consensus sequences COVID-19 D614G mutation E484K epidemiological events Genetic genetic diversity genetic variability GISAID hospital Illumina immunological L452R Lineage lineages MiSeq Molecular epidemiology Multiple Mutation N-terminal domain P.1 pandemic predominant primary care protocol Randomly Receptor-binding domain respiratory respiratory sample S protein SARS-CoV-2 SARS-CoV-2 strain SARS-CoV-2 virus selected sequenced Spain T478K the receptor-binding domain the S protein vaccination variants viruses was performed were used WGS while whole-genome sequencing [DOI] 10.1080/22221751.2021.2011617 PMC 바로가기 [Article Type] Coronaviruses
Emerging genetic diversity of SARS-CoV-2 RNA dependent RNA polymerase (RdRp) alters its B-cell epitopesSARS-CoV-2 RNA 의존성 RNA 중합효소(RdRp)의 유전적 다양성이 B 세포 에피토프를 변경Article Published on 2022-01-012022-09-11 Journal: Biologicals : journal of the International Associa [Category] SARS, 변종, [키워드] Alter B cell B cell epitope B cell epitopes B-cell epitope carried contributed COVID-19 Epitopes flexibility genetic diversity highlight identify India isolates life cycle linear mutant mutants Mutation mutations predicted Protein RdRP RdRp sequence RdRp sequences reported RNA RNA dependent RNA polymerase RNA dependent RNA polymerase (RdRp) RNA polymerase RNA virus SARS-CoV-2 SARS-CoV-2 RNA sequence Spread stability the SARS-CoV-2 Variation variations viral genome Virus life cycle Wuhan Wuhan, China [DOI] 10.1016/j.biologicals.2021.11.002 PMC 바로가기 [Article Type] Article
Genetic Diversity, Antimicrobial Resistance Pattern, and Biofilm Formation in Klebsiella pneumoniae Isolated from Patients with Coronavirus Disease 2019 (COVID-19) and Ventilator-Associated PneumoniaResearch Article Published on 2021-12-242022-10-27 Journal: BioMed Research International [Category] COVID-19, 치료기술, [키워드] acute respiratory distress Analysis analyzed antimicrobial antimicrobial resistance antimicrobial susceptibility Belgium biofilm caused Cluster Clusters Consensus coronavirus disease COVID-19 COVID-19 pandemic cross-sectional diffusion method Diversity finding Formation Genetic genetic diversity Genotype hospital Hospitalized ICU Infection infections intensive care Iran isolate Isolated Klebsiella pneumoniae MDR multidrug resistant no significant difference Pathogens patients with COVID-19 pattern pneumoniae polymerase chain Prevalence resistance resistance to antibiotics risk significant difference significantly higher similarity syndrome VAP Ventilator-associated pneumonia was done was used [DOI] 10.1155/2021/2347872 PMC 바로가기 [Article Type] Research Article
Complete genome sequencing of SARS-CoV-2 strains: A pilot survey in Palestine reveals spike mutation H245NResearch Note Published on 2021-12-232022-10-27 Journal: BMC Research Notes [Category] COVID-19, [키워드] Analysis average China Cluster Complete genome sequence Coronavirus-2 COVID-19 genetic diversity Genetic variation Genome sequencing globe Haplotype haplotypes highest international public health majority Molecular epidemiology Mutation network analysis nucleotide objective Palestine pandemic performed Phylogenetic analysis pilot study reported Result reveal RNA virus SARS-CoV-2 SARS-CoV-2 genome sequences sequence Sequencing severe respiratory syndrome spike mutation Spike-H245N statistically significant supplementary material unique whole genome [DOI] 10.1186/s13104-021-05874-4 PMC 바로가기 [Article Type] Research Note
Complete genome sequencing of SARS-CoV-2 strains: A pilot survey in Palestine reveals spike mutation H245NResearch Note Published on 2021-12-232022-10-27 Journal: BMC Research Notes [Category] Coronavirus, COVID-19, SARS, [키워드] Analysis average China Cluster Complete genome sequence Coronavirus-2 COVID-19 genetic diversity Genetic variation Genome sequencing globe Haplotype haplotypes highest international public health majority Molecular epidemiology Mutation network analysis nucleotide objective Palestine pandemic performed Phylogenetic analysis pilot study reported Result reveal RNA virus SARS-CoV-2 SARS-CoV-2 genome sequences sequence Sequencing severe respiratory syndrome spike mutation Spike-H245N statistically significant supplementary material unique whole genome [DOI] 10.1186/s13104-021-05874-4 PMC 바로가기 [Article Type] Research Note
Spatial epidemiology and genetic diversity of SARS-CoV-2 and related coronaviruses in domestic and wild animalsResearch Article Published on 2021-12-152022-10-28 Journal: PLoS ONE [Category] COVID-19, MERS, SARS, [키워드] affected American mink Analysis Animal host bat Belgium clade Clustering collected conducted coronavirus coronavirus 2 CoV Czech Republic D614G Delta epidemiological Epidemiology event France Genetic genetic diversity genome sequence genomic GISAID highest Human human SARS-CoV-2 human-to-animal transmission humans India infected with SARS-CoV-2 Mutation NCBI GenBank P323L Prevent Protein RaTG13 recombination event reduce related virus related viruses reported respiratory retrieved S protein SARS-CoV-2 similarity statistically significant strain Surveillance susceptibility the N protein threat Transmission USA Vaccine variant virus wild animal Y453F [DOI] 10.1371/journal.pone.0260635 PMC 바로가기 [Article Type] Research Article
The impact of the COVID-19 preventive measures on influenza transmission: molecular and epidemiological evidenceArticle Published on 2021-12-102023-06-14 Journal: International Journal of Infectious Diseases [Category] MERS, SARS, 신종인플루엔자, [키워드] case COVID-19 Effective population size Epidemiology genetic diversity Influenza [DOI] 10.1016/j.ijid.2021.12.323 PMC 바로가기 [Article Type] Article