Detection and phylogenetic analyses of spike genes in porcine epidemic diarrhea virus strains circulating in China in 2016–2017Short Report Published on 2017-10-102022-10-28 Journal: Virology Journal [Category] Coronavirus, [키워드] addition Amino acid Analysis analyzed Characteristics China Chinese circulating classical collected Complete contribute detection diarrhea epidemic diarrhea Epidemiology gastroenteritis Genetic genetic diversity Hainan identity indicated insertion island knowledge Molecular epidemiology nucleotide outbreak Pathogens PCR PEDV Phylogenetic analysis Porcine deltacoronavirus positive Result S gene sequenced Sequencing spike gene strain TGEV the epidemic the vaccine vaccine strain virulent virus virus strain [DOI] 10.1186/s12985-017-0860-z PMC 바로가기 [Article Type] Short Report
Limitations of using feline coronavirus spike protein gene mutations to diagnose feline infectious peritonitisResearch Article Published on 2017-10-052022-10-28 Journal: Veterinary Research [Category] Coronavirus, [키워드] Analysis Antigen coronavirus coronavirus spike protein determine diagnose Diagnosis faece Faeces fatal disease Feline infectious peritonitis gene mutation healthy histopathological identification immunohistochemistry implicated IMPROVE Infection limitation mutated Mutation positive Post-mortem Primers purified RNA RT-qPCR S gene Sample sensitivity Sequencing specificity Spread supplementary material tissue tissue sample viral spike was performed [DOI] 10.1186/s13567-017-0467-9 PMC 바로가기 [Article Type] Research Article
Detection of alpha- and betacoronaviruses in rodents from Yunnan, ChinaResearch Published on 2017-05-262022-10-28 Journal: Virology Journal [Category] Coronavirus, MERS, [키워드] Alpha alphacoronavirus alphacoronaviruses Analysis Apodemus Betacoronavirus characterized China collected conserved coronavirus Coronaviruses detection domains Eothenomy Evolution expected feature full-length genome functional genetic diversity Genome help Host infect intestinal investigated Lineage mammal much higher nucleocapsid protein nucleotide ORF3 ORF8 gene other coronavirus Pathogens Phylogenetic Rattus reservoir Result rodent S gene sequence similarity supplementary material Surveillance transcription regulatory sequence TRS upstream variant [DOI] 10.1186/s12985-017-0766-9 PMC 바로가기 [Article Type] Research
Characterization of Chinese Porcine Epidemic Diarrhea Virus with Novel Insertions and Deletions in GenomeArticle Published on 2017-03-092022-10-29 Journal: Scientific Reports [Category] Coronavirus, MERS, [키워드] Amino acid Analysis caused characterization China Chinese Comparative analysis Complete Deletion diarrhoea Epidemic experiment full-length genome genetic diversity genome sequence insertion isolates molecular Molecular epidemiology N-terminal Neonatal novel nucleotide outbreak pandemic pathogenic PEDV Phylogeny reported S gene S protein separated sequence strain Strains subgroup variant variations virus [DOI] 10.1038/srep44209 PMC 바로가기 [Article Type] Article
Novel Porcine Epidemic Diarrhea Virus (PEDV) Variants with Large Deletions in the Spike (S) Gene Coexist with PEDV Strains Possessing an Intact S Gene in Domestic Pigs in Japan: A New Disease SituationResearch Article Published on 2017-01-172022-10-28 Journal: PLoS ONE [Category] Coronavirus, MERS, [키워드] absence caused characterized Deletion deletions eight epidemic diarrhea Genetic genomic Genotype Infection Intact Isolation Japan Molecular epidemiology New nine novel ORF3 outbreak Outbreaks Pathogenesis PEDV pig Protein resulting S gene Seven situation strain the disease the Spike variant virus [DOI] 10.1371/journal.pone.0170126 PMC 바로가기 [Article Type] Research Article
Molecular Characterization of the ORF3 and S1 Genes of Porcine Epidemic Diarrhea Virus Non S-INDEL Strains in Seven Regions of China, 2015Research Article Published on 2016-08-052022-10-28 Journal: PLoS ONE [Category] Coronavirus, MERS, [키워드] Analysis analyzed characterization China Chinese classical Complete conserved East effort epidemic diarrhea epitope Evidence Evolution exhibited Genes Genetic genetic diversity homology indicated North nucleotide nucleotide sequence ORF3 PEDV Recombination recombination event reference gene Region S gene selected sequenced Seven similarity South strain Strains substitutions unique virus West [DOI] 10.1371/journal.pone.0160561 PMC 바로가기 [Article Type] Research Article
Alphacoronavirus in urban Molossidae and Phyllostomidae bats, BrazilShort Report Published on 2016-06-242022-10-28 Journal: Virology Journal [Category] Coronavirus, [키워드] Phyllostomidae alphacoronavirus Analysis bat bats Brazil Cluster conducted coronavirus CoV Cynomop eight emerging disease Evolution finding FIVE groups Host implicated indicated molecular Molossidae Occurrence Phylogenetic analysis Phylogeny positive RdRp gene RT-PCR S gene sequence Sequencing specificity specimen Spread strain Surveillance tested [DOI] 10.1186/s12985-016-0569-4 PMC 바로가기 [Article Type] Short Report
Epidemic strain YC2014 of porcine epidemic diarrhea virus could provide piglets against homologous challengeResearch Published on 2016-04-222022-10-28 Journal: Virology Journal [Category] Coronavirus, MERS, [키워드] acute diarrhea aligned Amino acid Analysis antigenic antigenicity caused China classical colostrum Complete control vaccine Critical demonstrated diarrhea effective Efficiency Epidemic epidemic diarrhea Epidemic strain Evidence genomic sequence homologous identity immune Immune protective efficiency immunized inactivated indicate insertion intestinal isolate Isolation neutralizing antibody Neutralizing antibody titer nucleotide nucleotide deletion nucleotide sequence occurred outbreak pathogenic PEDV Porcine epidemic diarrhea virus PROTECT Protective Result S gene sequence sera significantly higher Strains Symptom Vaccine variants Variation virulent virus [DOI] 10.1186/s12985-016-0529-z PMC 바로가기 [Article Type] Research
Co-Circulation of Canine Coronavirus I and IIa/b with High Prevalence and Genetic Diversity in Heilongjiang Province, Northeast ChinaResearch Article Published on 2016-01-152022-10-28 Journal: PLoS ONE [Category] Coronavirus, [키워드] accounted amplified Analysis canine China Chinese Co-infection coronavirus Diversity epidemiological Evidence Evolution exhibited genetic diversity homology identity immunization M gene Northeast China nucleotide positive Prevalence reaction regions RT-PCR RT-PCRs S gene sequence significantly Stool strain Strains [DOI] 10.1371/journal.pone.0146975 PMC 바로가기 [Article Type] Research Article
First complete genome sequence of European turkey coronavirus suggests complex recombination history related with US turkey and guinea fowl coronavirusesStandard Published on 2016-01-012022-10-30 Journal: The Journal of General Virology [Category] Coronavirus, [키워드] Analysis backbone Complete complex coronavirus Coronaviruses defined European event French full-length genome Genes Genetic genome sequence IBV Infectious Bronchitis Virus Italy North ORF Pathways predicted Recombination Region S gene sequence shown supported unique upstream virus viruses was determined [DOI] 10.1099/jgv.0.000338 PMC 바로가기 [Article Type] Standard