Computational gene expression profiling in the exploration of biomarkers, non-coding functional RNAs and drug perturbagens for COVID-19Research Article Published on 2020-11-232023-06-15 Journal: Journal of biomolecular structure & dynamics [Category] COVID19(2023년), MERS, SARS, [키워드] Bioconductor COVID-19 Differential gene expression drug perturbations lncRNAs miRNAs [DOI] 10.1080/07391102.2020.1850360 PMC 바로가기 [Article Type] Research Article
LncRNAs in the Type I Interferon Antiviral ResponseReview Published on 2020-09-032023-08-30 Journal: International Journal of Molecular Sciences [Category] E형 간염, [키워드] antiviral response lncRNAs Type I IFN [DOI] 10.3390/ijms21176447 PMC 바로가기 [Article Type] Review
Protein Coding and Long Noncoding RNA (lncRNA) Transcriptional Landscape in SARS-CoV-2 Infected Bronchial Epithelial Cells Highlight a Role for Interferon and Inflammatory ResponseArticle Published on 2020-07-072022-10-31 Journal: Genes [Category] COVID-19, SARS, [키워드] activated Activation acute inflammatory response acute respiratory syndrome Analysis Antiviral antiviral response bioinformatics Biomarkers bronchial bronchial epithelial bronchial epithelial cell category caused Cell cell death cells Community coronavirus Course COVID-19 differentially expressed disease expressed gene expression functional functional annotation gene expressions gene target hallmark highlight host cells host response Ifi44 IFI44L IFIT1 IFIT2 IFIT3 IFITM1 IFN IFN response IgG immune response Immunoglobulin in vitro induction Infection innate response interferon Interferon lambda investigated involved IPA IRF9 landscape lncRNA lncRNAs Long long noncoding RNA lung tissue MAPK MX1 Necrosis network analysis NHBE OAS2 OAS3 Ontology pathogenesis of COVID-19 pathogenic Pathway analysis Patient Replication Research response RNA role SARS-CoV-2 SARS-COV-2 infection spread of COVID-19 suppressed tissue TNF Transcriptome upregulated upstream viral infection Viral protein with COVID-19 [DOI] 10.3390/genes11070760 PMC 바로가기 [Article Type] Article
Identification and analysis of long non-coding RNAs that are involved in inflammatory process in response to transmissible gastroenteritis virus infectionResearch Article Published on 2019-11-042022-10-28 Journal: BMC Genomics [Category] Coronavirus, [키워드] acting Acute inflammation Analysis binding biological process Cell cell line differentially expressed element epithelial expression of gene gastroenteritis Genes identification Infection Inflammation inflammation response inflammatory process Inflammatory response intestinal intestinal epithelial cell involved leukemia lncRNA lncRNA binding proteins lncRNAs Long long non-coding RNA Messenger RNA microRNA miRNA miRNAs mRNAs Necrosis Next-generation sequencing NGS NLRs NOD-like receptor noncoding RNA p65 Pathways Phosphorylation PML profile Protein Proteins reduction Result RIG-I-like receptor RLRs TGEV TLRs TNF Toll-like receptor transcription factor transmissible gastroenteritis virus virus infection was used [DOI] 10.1186/s12864-019-6156-5 PMC 바로가기 [Article Type] Research Article
Identification and analysis of long non-coding RNAs in response to H5N1 influenza viruses in duck ( Anas platyrhynchos )Research Article Published on 2019-01-112023-05-23 Journal: BMC Genomics [Category] Fulltext, 조류인플루엔자, [키워드] Avian H5N1 influenza virus duck immune response lncRNAs [DOI] 10.1186/s12864-018-5422-2 PMC 바로가기 [Article Type] Research Article
Landscape of long non-coding RNAs in Trichophyton mentagrophytes-induced rabbit dermatophytosis lesional skin and normal skinarticle Published on 2018-07-312024-09-01 Journal: Functional & Integrative Genomics [Category] 백선증, [키워드] dermatophytosis lncRNAs rabbit RNA-Seq Trichophyton mentagrophytes [Article Type] article
Deep sequencing of the mouse lung transcriptome reveals distinct long non-coding RNAs expression associated with the high virulence of H5N1 avian influenza virus in miceResearch Paper Published on 2018-07-272023-05-31 Journal: Virulence [Category] Fulltext, 조류인플루엔자, [키워드] deep sequencing H5N1 influenza virus innate immune response lncRNAs Pathogenesis [DOI] 10.1080/21505594.2018.1475795 PMC 바로가기 [Article Type] Research Paper
Long Non-Coding RNAs in Hepatitis B Virus-Related Hepatocellular Carcinoma: Regulation, Functions, and Underlying MechanismsReview Published on 2017-11-232023-06-03 Journal: International Journal of Molecular Sciences [Category] B형 간염, [키워드] Apoptosis autophagy epithelial-mesenchymal transition HBV HBx HCC invasion and metastasis lncRNAs proliferation [DOI] 10.3390/ijms18122505 PMC 바로가기 [Article Type] Review