A Comparison of Bioinformatics Pipelines for Enrichment Illumina Next Generation Sequencing Systems in Detecting SARS-CoV-2 Virus StrainsSARS-CoV-2 바이러스 균주 검출 시 Illumina 차세대 시퀀싱 시스템 강화를 위한 생물정보학 파이프라인 비교Comparative Study Published on 2022-07-262022-09-11 Journal: Genes [Category] COVID19(2023년), SARS, 치료기술, 치료제, [키워드] acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Algorithm Amino acid bioinformatics bioinformatics pipeline capture method characterization coronavirus 2 coronavirus disease Coronavirus disease 2019 Coverage COVID-19 Critical Deletion downstream enrichment enrichment. full-length SARS-CoV-2 genome Generation Hope Human genome Illumina Indonesia insertion limitation Major mapped mapping metagenomic mutations next generation sequencing NGS normal nucleotide nucleotide substitution nucleotide substitutions pandemic Panel Previous studies previous study reads respiratory respiratory virus respiratory viruses SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 strain SARS-CoV-2 strains sequence Severe acute respiratory syndrome severe acute respiratory syndrome Coronavirus situation SNPs strain Strains System table the SARS-CoV-2 genome utilization Variation virus worldwide pandemic worsening [DOI] 10.3390/genes13081330 PMC 바로가기 [Article Type] Comparative Study
Spatial Syndromic Surveillance and COVID-19 in the U.S.: Local Cluster Mapping for Pandemic Preparedness미국의 공간 증후군 감시 및 COVID-19: 전염병 대비를 위한 지역 클러스터 매핑Article Published on 2022-07-222022-09-11 Journal: International Journal of Environmental Research an [Category] 변종, [키워드] accountability Act addition applied approach Clustering COVID-19 COVID-19 pandemic De facto disease dissemination domain framework GIS Government granular Health Insurance health systems HIPAA hospitals initial insurance Local Map mapping maps pandemic patient data provide provided Research retrospective shifting spatial epidemiology vaccination Vaccine variant variety while widespread [DOI] 10.3390/ijerph19158931 PMC 바로가기 [Article Type] Article
Mapping genetic variants to cellular contexts Research Highlights Published on 2022-07-112022-10-05 Journal: Nature Genetics [Category] 유전자 메커니즘, [키워드] cellular Genetic variant mapping [DOI] 10.1038/s41588-022-01136-6 [Article Type] Research Highlights
Comparative evaluation of flavonoids reveals the superiority and promising inhibition activity of silibinin against SARS-CoV-2플라보노이드의 비교 평가는 SARS-CoV-2에 대한 silibinin의 우수성과 유망한 억제 활성을 나타냅니다Article Published on 2022-07-012022-09-11 Journal: Phytotherapy research : PTR [Category] COVID19(2023년), SARS, 치료제, [키워드] amino acids antiviral activity binding binding affinity Comparative Compound enzyme Enzyme inhibition evaluated exhibited FDA-approved drug flavonoid flavonoids followed by highest highest binding affinity in silico in silico study in vitro in vitro evaluation in vitro study indicated inhibition activity inhibition assay Interaction interfere key amino acid key amino acids M pro mammalian cell mapping molecular docking plant plants protease Protein RdRP Replication reveal S protein Safe SARS-CoV-2 SARS-CoV-2 entry SARS-CoV-2 protein SARS-CoV-2 S protein Screening selectivity index Serine significantly silibinin silibinin. systematic literature search targets TMPRSS2 transmembrane serine protease virucidal was tested [DOI] 10.1002/ptr.7486 PMC 바로가기 [Article Type] Article
Mobile footprinting: linking individual distinctiveness in mobility patterns to mood, sleep, and brain functional connectivity Research Published on 2022-06-032022-10-05 Journal: Neuropsychopharmacology [Category] 바이오마커, [키워드] Affect affective age age and sex Brain calculated collected complex examined exhibited feature female functional identify increasingly individual mapping Metrics Mobile Psychiatric reduced Research statistical Structure Symptoms unique while [DOI] 10.1038/s41386-022-01351-z [Article Type] Research
Visualizing a Field of Research for the Coronavirus Replication in Humans with Knowledge Mapping: Evidence from Web of Science지식 매핑으로 인간의 코로나바이러스 복제 연구 분야 시각화: Web of Science의 증거Article Published on 2022-06-012022-09-11 Journal: Interdisciplinary sciences, computational life sci [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] Analysis Apoptosis apoptotic assembly cause caused Cell cell receptor Clustering cognitive coronavirus Coronavirus replication COVID-19 damaged database Evolution Factors fatal disease feature field Frequency fusion gene sequence global health security globe host adaptation hotspot Human humans indicated inhibit Knowledge mapping living environment mapping mechanism MERS mutant Mutation mutations outbreak package pathogenicity Prevent promote R software Replication replication mechanism Research respiratory diseases S protein severe respiratory disease severe respiratory diseases spike Spike protein Spread the epidemic Transmission unique Variation viral infection Viral protein viral replication virus Virus evolution virus infection Web of Science widespread zone [DOI] 10.1007/s12539-022-00504-4 PMC 바로가기 [Article Type] Article
Planning and implementing a targeted polio vaccination campaign for Somali mobile populations in Northeastern Kenya based on migration and settlement patternsarticle Published on 2022-05-312024-09-01 Journal: Ethnicity & Health [Category] 폴리오, [키워드] mapping migrants Mobile populations polio qualitative research vaccination [Article Type] article
Mapping the epithelial–immune cell interactome upon infection in the gut and the upper airways Research Published on 2022-05-022022-10-05 Journal: NPJ Systems Biology and Applications [Category] COVID19(2023년), SARS, 유전자 메커니즘, [키워드] airway Alter approach Cell cell interaction Ciliated epithelial cells colonic complex disease driving epithelial epithelial cell Evidence experimental analysis Gut ileal immune cell populations immune response Impact Increasing Infection Inflammation Inflammatory responses Interaction intercellular intestinal Local mapping methodology molecular target Organoid SARS-CoV-2 SARS-COV-2 infection single-cell RNA-seq systemic immune response upper airway viral infection [DOI] 10.1038/s41540-022-00224-x [Article Type] Research
Identification of B-Cell Epitopes for Eliciting Neutralizing Antibodies against the SARS-CoV-2 Spike Protein through Bioinformatics and Monoclonal Antibody Targeting생물정보학 및 단일클론 항체 표적화를 통한 SARS-CoV-2 스파이크 단백질에 대한 중화 항체 유도를 위한 B-세포 에피토프 식별Review Published on 2022-04-142022-09-11 Journal: International Journal of Molecular Sciences [Category] COVID19(2023년), SARS, 변종, 진단, 치료법, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus adaptive Adaptive immunity Analysis antibody approach Astra Zeneca B cell B cells B-cell B-cell epitope B-cell epitopes caused cells complex coronavirus COVID-19 COVID-19 vaccine Critical effective Eliciting epitope Epitopes global public health Health crisis Hospitalization identification Immunity Impact in silico in vivo less linear B-cell epitope mapping membrane Moderna monoclonal antibodies monoclonal antibody multi-epitope peptide vaccine Neutralizing Neutralizing antibodies neutralizing antibody new SARS-CoV-2 nucleocapsid protein offer peptide Pfizer-BioNTech potent produced Protective provide reducing respiratory SARS-CoV-2 severe acute respiratory syndrome Coronavirus severe acute respiratory syndrome coronavirus 2 spike Spike protein targeting the SARS-CoV-2 three-dimensional structure transmission of SARS-CoV-2 Vaccine Vaccines variants virus viruses Wuhan strain [DOI] 10.3390/ijms23084341 PMC 바로가기 [Article Type] Review
Genomic Epidemiology and Transmission Dynamics of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Congregate Healthcare Facilities in Santa Clara County, California캘리포니아 산타클라라 카운티의 집단 의료 시설에서 발생한 중증 급성 호흡기 증후군 코로나바이러스 2(SARS-CoV-2)의 게놈 역학 및 전파 역학Article Published on 2022-03-092022-09-11 Journal: Clinical Infectious Diseases: An Official Publicat [Category] SARS, 유전자 메커니즘, 치료기술, 치료제, [키워드] accounted Analysis Care carried component conducted confirmed COVID-19 case coronavirus 2 death Dynamics elderly Epidemiological investigation Epidemiology facility genomic sequencing Genomics healthcare index case infection control Lineage Long-term care mapping morbidity and mortality outbreak Outbreak investigation Outbreaks pattern phylogenetic analyses Phylogenetic analysis providers. reduce respiratory risk Safe SARS-CoV-2 SARS-CoV-2 testing study period Surveillance sustained Transmission triggering Viral transmission Whole-genome sequence whole-genome sequences whole-genome sequencing [DOI] 10.1093/cid/ciab553 PMC 바로가기 [Article Type] Article