Molecular characterization, phylogenetic and variation analyses of SARS-CoV-2 strains in TurkeyResearch Article Published on 2021-10-072022-10-31 Journal: Future Microbiology [Category] COVID-19, MERS, SARS, [키워드] Analysis B.1 B.1.1 clades Clusters Complete Complete genome sequencing COVID-19 European Genome genome analysis initiative isolate Lineage MiSeq patients Phylogenetic Phylogenetic analysis platform polymorphism SARS-CoV-2 SARS-CoV-2 isolate SARS-CoV-2 strain sequence Sequencing similarity single-nucleotide SNP SNP analysis the SARS-CoV-2 Turkey unique SNP Variation viral genome sequence was used [DOI] 10.2217/fmb-2021-0118 PMC 바로가기 [Article Type] Research Article
Case Report of COVID-19 after Full Vaccination: Viral Loads and Anti-SARS-CoV-2 AntibodiesCase Report Published on 2021-09-302022-10-31 Journal: Diagnostics [Category] COVID-19, [키워드] Alpha variant Analysis anti-SARS-CoV-2 antibodies antibody B.1.1.7 COVID-19 demonstrated effective vaccine expected immune responses indicated Infection load manifested mild COVID-19 symptoms mRNA vaccine Prevent produced report reported SARS-CoV-2 SARS-CoV-2 lineage sore throat Stage Viraemia viral genome sequence Viral load viral loads virus with COVID-19 [DOI] 10.3390/diagnostics11101815 PMC 바로가기 [Article Type] Case Report
Humoral and cellular immunity and the safety of COVID-19 vaccines: a summary of data published by 21 May 2021체액 및 세포 면역과 COVID-19 백신의 안전성: 2021년 5월 21일까지 발표된 데이터 요약Review Published on 2021-09-252022-09-11 Journal: International immunology [Category] SARS, 변종, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 antibody caused Cellular immune response cellular immunity clinical Clinical data clinical study clinical trials consequence coronavirus coronavirus disease Coronavirus disease 2019 COVID-19 deaths dissect Efficacy humoral immune responses indicated Isolation public health Rapid reactogenicity response safety profile SARS-CoV-2 severe acute respiratory syndrome Coronavirus T cell Vaccine Vaccine development variant viral genome sequence [DOI] 10.1093/intimm/dxab061 PMC 바로가기 [Article Type] Review
Mutational spectrum of SARS-CoV-2 during the global pandemic세계적 대유행 동안 SARS-CoV-2의 돌연변이 스펙트럼Article Published on 2021-08-272022-09-10 Journal: Experimental & Molecular Medicine [Category] MERS, SARS, 변종, [키워드] accumulate Analysis Asia base collected collection time coronavirus COVID-19 pandemic cytosine directional ENhance equilibrium Evidence evidence of Evolution Evolutionary biology exhibit extreme genetic material Genome Genome evolution genome sequence global pandemic guanine help human population information interactions monitoring much higher Mutation mutational processe mutational processes mutational spectrum natural selection nucleic acid predict reached replaced REPLACED BY researcher responsible SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 mutations SARS-CoV-2 viral infection SARS-CoV-2 virus Science sequence South Korea Spectrum substitutions technology the SARS-CoV-2 genome the SARS-CoV-2 virus Transmission uracil Viral viral genes viral genome sequence viral genome sequences viral infection Viral transmission virus viruses was performed [DOI] 10.1038/s12276-021-00658-z PMC 바로가기 [Article Type] Article
Superspreaders drive the largest outbreaks of hospital onset COVID-19 infectionsResearch Article Published on 2021-08-242022-10-31 Journal: eLife [Category] COVID-19, MERS, [키워드] Algorithm applied build Cambridge caused Cluster collected COVID-19 infection COVID-19 pandemic determine develop effective events Factor finding First wave foundation generate Genetic genetic data genetic information genetic material global public health HCWs Health care worker help heterogeneity hospital Hospital wards Hospital-acquired infection hospitals IMPROVE incidence individual individuals infected individuals Infection infection control information Intensive measure NHS nosocomial Nosocomial transmission notable outbreak Patient provide provided recorded reduce reporting symptoms researcher Retrospective analysis Sample SARS-CoV-2 SARS-COV-2 infection SARS-CoV-2 transmission sequence sick Spread spreads superspreader swabbing Symptoms the epidemic the SARS-CoV-2 virus These data Transmission transmission of SARS-CoV-2 transmitted Trust university unlikely viral genome sequence Viral transmission virus virus spread vulnerable patient were infected [DOI] 10.7554/eLife.67308 PMC 바로가기 [Article Type] Research Article
Haplotype Explorer: an infection cluster visualization tool for spatiotemporal dissection of the COVID-19 pandemicInvestigation Published on 2021-08-232022-10-31 Journal: G3 (Bethesda, Md.) [Category] COVID-19, MERS, SARS, [키워드] acute respiratory syndrome Cluster collected consequence coronavirus coronavirus disease COVID-19 COVID-19 epidemic COVID-19 pandemic Dengue develop dissect E-gene Effectiveness epidemiological Epidemiology example feature functional Genome Haplotype Haplotype network Infection infection clusters Infectious disease Infectious diseases limitation outbreak Perspective Phylogenetic relationship provide reached Region SARS-CoV-2 SARS-CoV-2 genome sequence serotype spatiotemporal viral genome sequence virus Wuhan, China [DOI] 10.1093/g3journal/jkab126 PMC 바로가기 [Article Type] Investigation
A mixed-methods approach to elucidate SARS-CoV-2 transmission routes and clustering in outbreaks in native workers and labour migrants in the fruit and vegetable packaging industry in South Holland, the Netherlands, May to July 20202020년 5월부터 7월까지 네덜란드 사우스 홀랜드의 과일 및 채소 포장 산업에서 토착 노동자와 노동 이주자의 발병에서 SARS-CoV-2 전염 경로 및 클러스터링을 설명하기 위한 혼합 방법 접근Article Published on 2021-08-012022-09-11 Journal: International Journal of Infectious Diseases [Category] SARS, 치료기술, 치료제, [키워드] applied approach being Cluster Clustering Contact contributed COVID-19 Data analysis facilitated food Food industry Health policy household transmission implementation impression Labour migrants Netherlands observation outbreak Outbreaks preventative measure preventative measures proportional representation public health Research risk factor Risk factors SARS-CoV-2 SARS-CoV-2 transmission Sequencing South Transmission transmission route Transmission routes viral genome sequence viral genome sequences whole-genome sequencing [DOI] 10.1016/j.ijid.2021.06.021 PMC 바로가기 [Article Type] Article
Evidence for increased breakthrough rates of SARS-CoV-2 variants of concern in BNT162b2-mRNA-vaccinated individualsBNT162b2-mRNA 백신 접종 개인에서 우려되는 SARS-CoV-2 변이체의 돌파율 증가에 대한 증거Article Published on 2021-06-142022-09-10 Journal: Nature Medicine [Category] MERS, SARS, 변종, [키워드] apprehension B.1.1.7 B.1.351 B.1.351 variant BNT162b2 BNT162b2 mRNA BNT162b2 mRNA COVID-19 vaccine BNT162b2 mRNA vaccine caused cohort study Complete controls COVID-19 vaccine distribution dose effective Effectiveness evade Evidence evidence of first dose genomic sequencing individual Infection laboratory assays mRNA nasopharyngeal swabs neutralization of BNT162b2 performed phylogenetics positive Prevent proportion reduced SARS-CoV-2 SARS-COV-2 infection SARS-CoV-2 infections SARS-CoV-2 variant second dose sera service single dose Spread tested vaccination Vaccine vaccinee vaccinees variants variants of concern Viral viral genome sequence viral infection Viral variants VoC VOCs [DOI] 10.1038/s41591-021-01413-7 PMC 바로가기 [Article Type] Article
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 Research Published on 2021-06-072022-10-05 Journal: Nature [Category] SARS, 변종, 유전자 메커니즘, [키워드] absence Affect Containment strategy Critical dominant effective effort epidemiological Europe European country Evidence explain Genomic surveillance incidence infection with SARS-CoV-2 introduced lack Local Phylogenetic analysis reduced rising SARS-CoV-2 variant Spain Spread Transmissibility Transmission transmission of SARS-CoV-2 Travel variant viral genome sequence virus spread [DOI] 10.1038/s41586-021-03677-y [Article Type] Research
Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic기존 tRees(UShER)에 초고속 샘플 배치로 SARS-CoV-2 대유행에 대한 실시간 계통발생학 가능Article Published on 2021-06-012022-09-11 Journal: Nature Genetics [Category] SARS, 변종, 유전자 메커니즘, [키워드] approach barrier Community Complete Contact tracing Data visualization described genomic human populations IMPROVE information Laboratory Local molecular new virus pandemic Phylogenetic phylogenetics Phylogeny reference phylogeny Research Sample Santa Cruz SARS-CoV-2 SARS-CoV-2 virus sequence speed Spread structural biology the SARS-CoV-2 the SARS-CoV-2 virus Transmission dynamics tree University of California viral genome viral genome sequence viral genome sequences viral genomes virus [DOI] 10.1038/s41588-021-00862-7 PMC 바로가기 [Article Type] Article