Estimating and modelling the transmissibility of Middle East Respiratory Syndrome CoronaVirus during the 2015 outbreak in the Republic of KoreaOriginal Article Published on 2017-08-172022-10-30 Journal: Influenza and Other Respiratory Viruses [Category] Coronavirus, MERS, [키워드] 95% confidence interval approaches average basic reproductive number Bayesian Contact demonstrated effective estimate identify Korean learning Mathematical modelling measure methodology middle Middle East Middle Eastern respiratory syndrome coronavirus objective outbreak overlapped Parameter estimation produced provide public health threat Quantitative ranged respiratory respiratory infection Result secondary case significantly higher South Korean outbreak Spread statistical statistical analysis susceptible Transmissibility Transmission Transmission dynamics Transmission model [DOI] 10.1111/irv.12467 PMC 바로가기 [Article Type] Original Article
New emergence pattern with variant porcine epidemic diarrhea viruses, South Korea, 2012–2015Article Published on 2016-06-212022-11-01 Journal: Virus research [Category] Coronavirus, MERS, [키워드] all age group Analysis analyzed Bayesian breakpoint China circulating classical coding gene demonstrated diffusion epidemic diarrhea explosive outbreak introduced Isolation neutralized New Novel strains outbreak pandemic PEDV Piglets Porcine epidemic diarrhea virus Protein Recombination South Korea strain suggested the antibody the Spike the United State Transmission USA Vaccine variant virus viruses while [DOI] 10.1016/j.virusres.2016.06.013 PMC 바로가기 [Article Type] Article
Molecular epidemiology and evolutionary histories of human coronavirus OC43 and HKU1 among patients with upper respiratory tract infections in Kuala Lumpur, MalaysiaResearch Published on 2016-02-252022-10-28 Journal: Virology Journal [Category] Coronavirus, MERS, [키워드] acute respiratory symptom Analysis Asia assigned Bayesian betacoronavirus Betacoronavirus Characteristics China circulating circulation clinical symptom Coronaviruses country detection rate distribution Epidemiology evolutionary dynamics Genetic genetic diversity Genotype genotypes genotypic HCoV-HKU1 HCoV-OC43 HKU1 human coronavirus OC43 Infection isolate Japan Lineage lineages location lowest majority Malaysia molecular Molecular epidemiology Multiplex PCR novel lineage nucleocapsid Patient phenotypic Phylogenetic phylogenetics positive Recombination reported respiratory symptom Result screened sequenced severity SIGN specimen spike gene spike glycoprotein strain supplementary material tested TMRCA tropical upper respiratory infection upper respiratory tract Virus evolution [DOI] 10.1186/s12985-016-0488-4 PMC 바로가기 [Article Type] Research
Phylogenetic and phylogeographic mapping of the avian coronavirus spike protein-encoding gene in wild and synanthropic birdsArticle Published on 2015-03-112022-11-01 Journal: Virus research [Category] Coronavirus, MERS, [키워드] analysed analyses Analysis analysis applied avian coronavirus Avian coronaviruses Bayesian Bayesian framework Bayesian phylogeography Brazil Cluster collected conducted coronavirus Evolution evolutionary dynamics Evolutionary rate exhibit GenBank database gene sequence Host increase in molecular assays molecular evolution Phylogenetic Phylogeny positive reconstructed responsible sequence Swab tracheal virus [DOI] 10.1016/j.virusres.2015.03.002 PMC 바로가기 [Article Type] Article
Selection on a Variant Associated with Improved Viral Clearance Drives Local, Adaptive Pseudogenization of Interferon Lambda 4 ( IFNL4 )개선된 바이러스 제거와 관련된 변이체에 대한 선택은 인터페론 람다 4(IFNL4)의 국소적 적응형 가성화를 유도합니다.Research Article Published on 2014-10-162022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] ABC adaptive allele America Antiviral antiviral activity approach Approximate Asia Asian association Bayesian clearance complex conserved disease drive driving East Elimination ENCODE environmental force Europe European Evidence evidence of fixation Frame Frequency functional Genetic genetic association Genetic variant Genetic variation groups HCV hepatitis C hepatitis C virus heterogeneity Human human populations IFN-λ IFNL4 Improved inactivation Infection insertion Interferon lambda Lambda mammal mammals Migration moderate Mutation Open reading frame phenotype phenotypic diversity Population populations positive Positive selection Protein provide pseudogene raise raising reached resulting Selection selective SNP SNPs strength susceptibility the strongest turn variant virus [DOI] 10.1371/journal.pgen.1004681 PMC 바로가기 [Article Type] Research Article
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic DataResearch Article Published on 2014-01-232022-10-28 Journal: PLoS Computational Biology [Category] Coronavirus, MERS, [키워드] 2003 After Analysis analysis approach approach Author Bayesian caused Containment strategy detect disease DNA early stage Epidemic Epidemics epidemiological event events genetic data genome sequence Genome sequences heterogeneous identify IMPROVE Infected infections Infectious disease information Making methodological one individual outbreak Outbreaks pathogen R package recent reconstruction respiratory Secondary infection sequence severe statistical statistically subsequent subsequent infections super-spreaders the disease Transmission transmitted understanding variety [DOI] 10.1371/journal.pcbi.1003457 PMC 바로가기 [Article Type] Research Article
Comparison of different sampling strategies and laboratory methods for the detection of C. jejuni and C. coli from broiler flocks at primary productionArticle Published on 2013-09-012023-06-02 Journal: Zoonoses and Public Health [Category] 조류인플루엔자, [키워드] Bayesian boot swabs Broilers Campylobacter primary production sampling. [DOI] 10.1111/zph.12009 PMC 바로가기
Epidemiological consequences of household-based antiviral prophylaxis for pandemic influenzaArticle Published on 2013-04-062023-06-08 Journal: Journal of the Royal Society Interface [Category] 신종인플루엔자, [키워드] R* A(H1N1)pdm Bayesian doubling time Markov chain [DOI] 10.1098/rsif.2012.1019 PMC 바로가기