SARS-CoV-2 spike-protein D614G mutation increases virion spike density and infectivitySARS-CoV-2 스파이크 단백질 D614G 돌연변이는 비리온 스파이크 밀도와 감염성을 증가시킵니다.Article Published on 2020-11-262022-09-10 Journal: Nature Communications [Category] SARS, 변종, [키워드] ACE2 ACE2-expressing cell ACE2-expressing cells Alter binding Cell D614G D614G mutation D614G variant functional increase less mutated neutralization produced pseudovirus pseudoviruses S protein S proteins S-protein SARS-CoV-2 SARS-CoV-2 variant SARS-CoV-2 variants sensitivity spike-protein virion Virology Virus-like particle virus-like particles [DOI] 10.1038/s41467-020-19808-4 PMC 바로가기 [Article Type] Article
SARS-CoV-2 replicates in respiratory ex vivo organ cultures of domestic ruminant speciesArticle Published on 2020-11-242023-07-01 Journal: Veterinary microbiology [Category] SARS, [키워드] ACE2 cattle D614G PIGS Replication Respiratory ex vivo organ cultures SARS-CoV-2 sheep tropism [DOI] 10.1016/j.vetmic.2020.108933 PMC 바로가기 [Article Type] Article
Analysis of Indian SARS-CoV-2 Genomes Reveals Prevalence of D614G Mutation in Spike Protein Predicting an Increase in Interaction With TMPRSS2 and Virus InfectivityMicrobiology Published on 2020-11-232022-10-31 Journal: Frontiers in Microbiology [Category] COVID-19, [키워드] 5′ UTR acute respiratory syndrome Amplicon sequencing Analysis Asia caused clade Concordance coronavirus Coronavirus disease 2019 COVID-19 D614G D614G mutation disease transmission docking Europe Evolution FIVE Genome global pandemic Gujarat hinge region increase India Infectivity Local molecular Mutation network analysis ORF1ab gene Phylogeny Prevalence prevalent Protein protein-protein interaction reported S1 domain SARS-CoV-2 SARS-CoV-2 genome sequenced genome spike the disease the Spike TMPRSS2 TMPRSS2 protease Transmission Viral load viral RNA sequencing virus [DOI] 10.3389/fmicb.2020.594928 PMC 바로가기 [Article Type] Microbiology
Genetic diversity of SARS-CoV-2 and clinical, epidemiological characteristics of COVID-19 patients in Hanoi, Vietnam베트남 하노이에서 SARS-CoV-2의 유전적 다양성과 COVID-19 환자의 임상, 역학적 특성Research Article Published on 2020-11-172022-08-13 Journal: PLoS ONE [Category] MERS, SARS, 유전자 메커니즘, [키워드] accompanied Admission analysed Asia B.1.1 lineage Characteristics China circulating Cluster country COVID-19 case COVID-19 patient Cycle threshold value D614G diarrhoea disease severity dominant dry cough epidemiological Europe European European country Fever Genetic variant genomes hospitalisation Illumina Illumina Miseq Local male median median age MOST Mutation mutations NC_045512 New Nsp12 P323L Patient positive patient Prevalence reference sequence reflected Result Russia SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 genomes SARS-CoV-2 RT-PCR sequence homology sequenced sore throat strain Strains Symptom transition Tropical Diseases variant viruses [DOI] 10.1371/journal.pone.0242537 PMC 바로가기 [Article Type] Research Article
Substitutions in Spike and Nucleocapsid proteins of SARS-CoV-2 circulating in South America남미에서 순환하는 SARS-CoV-2의 스파이크 및 뉴클레오캡시드 단백질의 치환Article Published on 2020-11-012022-09-11 Journal: Infection, genetics and evolution : journal of mol [Category] SARS, 치료법, [키워드] ACE Algorithm Amino acid Betacoronavirus Brazil circulating collected conserved country COVID-19 diagnostic assay COVID-19 pandemic D614G diagnostic tests Ecuador Epidemic Frequency genetic variability Genome genomes genomic Genomic surveillance genus genus Betacoronavirus high affinity human population Illumina Miseq immunogenic infect information Lower respiratory tract muscle N protein Non-synonymous substitutions nucleocapsid nucleotide nucleotide sequence Oxford pandemic Protein Proteins protocol receptor replaced REPLACED BY reported respiratory responsible SARS-CoV-2 SARS-CoV-2 pandemic sequence sequences Seven South South America spike Spike protein structural protein structural proteins Substitution substitutions Surveillance synonymous substitutions the SARS-CoV-2 the spike protein Therapeutics Vaccines virus [DOI] 10.1016/j.meegid.2020.104557 PMC 바로가기 [Article Type] Article
A Founder Effect Led Early SARS-CoV-2 Transmission in Spain스페인에서 초기 SARS-CoV-2 전파를 주도한 파운더 효과Genetic Diversity and Evolution Published on 2020-10-302022-09-10 Journal: Journal of Virology [Category] MERS, 변종, 유전자 메커니즘, 치료기술, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus analyses Analysis Bayesian characterized clade clades Cluster coronavirus country COVID-19 COVID-19 case D614 variant D614G D614G substitution diffusion displaying dissemination Effect Europe European country explosion FIVE founder effect higher infectivity independent majority maximum-likelihood MOST Multiple occurred ORF8 pandemic phylodynamic phylodynamics Phylogenetic phylogenetic analyses phylogeography Prevalence prevalent pseudotyped virion pseudotyped virions Region replaced REPLACED BY respiratory S gene SARS-CoV-2 SARS-CoV-2 pandemic SARS-CoV-2 spike protein sequence sequences severe acute respiratory syndrome Coronavirus severe acute respiratory syndrome coronavirus 2 Spain Spike protein the epidemic the SARS-CoV-2 the spike protein transmitted variant virus viruses whole-genome Whole-genome sequence Wuhan Wuhan, China [DOI] 10.1128/JVI.01583-20 PMC 바로가기 [Article Type] Genetic Diversity and Evolution
[Biochemical and statistical lessons from the evolution of the SARS-CoV-2 virus: paths for novel antiviral warfare]Review Published on 2020-10-092023-07-06 Journal: Comptes rendus biologies [Category] SARS, [키워드] D614G ddhCTP F1757L L37F Non-homothetic growth TN93 tRNA nucleotidyltransferase. [DOI] 10.5802/crbiol.16 [Article Type] Review
Whole-Genome Sequence of SARS-CoV-2 Isolate Siena-1/2020Genome Sequences Published on 2020-09-242022-10-29 Journal: Microbiology Resource Announcements [Category] COVID-19, [키워드] acute respiratory syndrome Amino acid Amplicon sequencing approaches coding sequence Complete coronavirus D614G Direct RNA sequencing Europe genome sequence isolate Lineage Mutation nanopore sequencing prevalent SARS-CoV-2 the spike protein was obtained [DOI] 10.1128/MRA.00944-20 PMC 바로가기 [Article Type] Genome Sequences
Geographical Distribution of Genetic Variants and Lineages of SARS-CoV-2 in Chile칠레에서 SARS-CoV-2의 유전적 변이 및 계통의 지리적 분포Public Health Published on 2020-09-222022-09-11 Journal: Frontiers in Public Health [Category] MERS, SARS, 변종, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 America Analysis caused China construction coronavirus country COVID-19 D614G database Epidemiology Europe generate Genetic Genetic variant genetic variants Genome genomic variation genomic variations help impacted Infection information Lineage lineage B.1 lineages measure MONITOR Occurrence pandemic protocol protocols public health Region regions respiratory SARS-CoV- 2 SARS-CoV-2 Scientific community similarity USA variant variants Viral viral genome viral genomes viral sample viral samples viral variant Viral variants virus virus variant virus variants [DOI] 10.3389/fpubh.2020.562615 PMC 바로가기 [Article Type] Public Health
Genetic grouping of SARS-CoV-2 coronavirus sequences using informative subtype markers for pandemic spread visualization전염병 확산 시각화를 위한 유익한 하위 유형 마커를 사용한 SARS-CoV-2 코로나바이러스 서열의 유전적 그룹화Research Article Published on 2020-09-172022-08-13 Journal: PLoS Computational Biology [Category] SARS, 유전자 메커니즘, [키워드] added addition Analysis Applying Asia Author base cause Clustering complementary confirmed case Containment strategy COVID-19 COVID-19 pandemic D614G detect disease spread distribution downstream analyses effective efficient epidemiological studies Epidemiological study Europe followed by founder effect Frequency frequency analysis generate Genetic Genetic variant genetic variants Geographic distribution GISAID GISAID database Github highlight identify include increasingly individuals infected individual infected individuals information Local Major marker modeling Mutation New York Nextstrain Novel coronavirus nucleotide nucleotides ORF1ab outbreak pandemic Phylogenetic prevalent researcher responsible SARS-CoV-2 SARS-CoV-2 coronavirus SARS-CoV-2 evolution SARS-CoV-2 pandemic SARS-CoV-2 sequence SARS-CoV-2 sequences selection pressure sequence sequenced spatiotemporal Spike protein Spread subtype Subtypes temporal dynamics the spike protein the United State The United States therapeutic threshold United States utility Vaccine variant Viral viral dynamics viral genome viral genomes Viral transmission virus Visualization website [DOI] 10.1371/journal.pcbi.1008269 PMC 바로가기 [Article Type] Research Article