Targeting SARS-CoV-2 viral proteases as a therapeutic strategy to treat COVID-19COVID-19를 치료하기 위한 치료 전략으로 SARS-CoV-2 바이러스 프로테아제 표적화Review Published on 2021-05-012022-09-11 Journal: Journal of medical virology [Category] SARS, 치료제, [키워드] 3 chymotrypsin-like cysteine protease 3CL pro acute respiratory syndrome Amino acid caused chymotrypsin coronavirus coronavirus disease Coronavirus disease 2019 Coronavirus main protease COVID-19 COVID-19 infection CoVs cysteine cysteine protease death Epidemic Infection information MERS Middle East Middle East respiratory syndrome outbreak Papain papain-like cysteine protease. Papain-like protease protease Protein SARS Coronavirus SARS infection SARS-CoV SARS-CoV-2 SARS-CoV-2 viral Severe acute respiratory syndrome similarity Spread Support syndrome targeting the United State Therapeutic molecule therapeutic molecules therapeutic strategy treat treatment strategy United States Viral proteins virus [DOI] 10.1002/jmv.26814 PMC 바로가기 [Article Type] Review
A comprehensive SARS-CoV-2 genomic analysis identifies potential targets for drug repurposing포괄적인 SARS-CoV-2 게놈 분석을 통해 약물 용도 변경의 잠재적 표적 식별Research Article Published on 2021-03-182022-09-10 Journal: PLoS ONE [Category] SARS, 변종, 신약개발, [키워드] 3CLpro acute infection acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Alvimopan analysed bictegravir caused China city clinical trials conserved coronavirus Darifenacin drug target drugs ENhance Evolution Frequency Genes Genome Genomic analysis Haplotype HCoV highest human coronavirus identify infection rate Irbesartan matter molecular molecular dynamics molecular dynamics simulations Mutation mutation rate Nebivolol non-structural protein nsp10 Nsp3 nsp5 nucleoprotein Papain Papain-like protease PLPro population level protease provide reported respiratory respiratory tract illness SARS-CoV-2 severe acute respiratory syndrome Coronavirus Spread structural protein suggested Symptom target Therapeutics threshold Transmission Variability variant Viral viral genome virus Virus evolution were used Wuhan [DOI] 10.1371/journal.pone.0248553 PMC 바로가기 [Article Type] Research Article
Drug design and repurposing with DockThor-VS web server focusing on SARS-CoV-2 therapeutic targets and their non-synonym variantsSARS-CoV-2 치료 표적 및 비동의어 변이체에 초점을 맞춘 DockThor-VS 웹 서버를 통한 약물 설계 및 용도 변경Article Published on 2021-03-102022-08-31 Journal: Scientific Reports [Category] SARS, 변종, 신약개발, 치료제, [키워드] (RdRp) 3CLpro 3D structure caused Computational platforms and environments COVID-19 curated disease docking domain drug Drug repurposing effective experiment facilitate FDA-approved drug FDA-approved drugs genetic information Health Organization High-throughput screening identify market methodology MPro Mutation N protein Non-synonymous Nsp12 Nsp15 Nsp3 nsp5 pandemic disease Papain performed platform PLPro potential therapeutic target potential therapeutic targets present provide RdRP SARS-CoV-2 SARS-CoV-2 infections SARS-CoV-2 virus selected spike Structure Structure-based drug design the SARS-CoV-2 virus therapeutic target therapeutic targets Treatment variant variations Virtual drug screening Virtual screening web server WHO wild type World Health Organization [DOI] 10.1038/s41598-021-84700-0 PMC 바로가기 [Article Type] Article
Establishing an Analogue Based In Silico Pipeline in the Pursuit of Novel Inhibitory Scaffolds against the SARS Coronavirus 2 Papain-Like ProteaseSARS 코로나바이러스 2 파파인 유사 프로테아제에 대한 새로운 억제 스캐폴드를 추구하기 위해 인실리코 파이프라인 기반 유사체 구축Article Published on 2021-02-202022-09-10 Journal: Molecules [Category] MERS, 신약개발, 치료제, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus analogue analogues approved AutoDock AutoDock tools binding affinities binding affinity caused comparable Compound conducted Consequences coronavirus COVID-19 crystal structure cysteine cysteine proteases docked docking drug Drug discovery drug-likeness electrostatic Enamine Establishing fatality feature identify in silico in vitro inhibit inhibitor inhibitors Interaction knowledge lack Ligand M pro molecular docking novel outbreak pandemic Papain Papain-like protease performed PLpro predicted profiles protease protein-ligand interaction Region Replication respiratory SAR SARS coronavirus 2 SARS coronaviruses SARS-CoV-1 SARS-CoV-2 scaffold hopping severe acute respiratory syndrome Coronavirus similarity targets Viral viral replication Virtual screening [DOI] 10.3390/molecules26041134 PMC 바로가기 [Article Type] Article
In Silico Screening of the DrugBank Database to Search for Possible Drugs against SARS-CoV-2SARS-CoV-2에 대항할 수 있는 약물을 찾기 위한 DrugBank 데이터베이스의 실리코 스크리닝Article Published on 2021-02-192022-09-10 Journal: Molecules [Category] MERS, 신약개발, 치료제, [키워드] Analysis applicability biological activity candidate Compound coronavirus Coverage COVID-19 dataset death docking docking analysis domain drug DrugBank DrugBank database drugs FIVE inhibitors of SARS-CoV-2 molecular molecular dynamics molecular orbitals Papain Papain-like protease parameter performed protease QSAR R 2 relationship reported responsible reveal RNA-dependent RNA polymerase robust SARS-CoV-2 Screening suggested target was related [DOI] 10.3390/molecules26041100 PMC 바로가기 [Article Type] Article
DockCoV2: a drug database against SARS-CoV-2DockCoV2: SARS-CoV-2에 대한 약물 데이터베이스AcademicSubjects/SCI00010 Published on 2021-01-082022-09-10 Journal: Nucleic Acids Research [Category] 치료법, 치료제, [키워드] (RdRp) 3CLpro ACE2 angiotensin binding affinity COVID-19 pandemic database develop docking drug drugs effective ENCODE enzyme Enzymes family member Health Health crisis Health Insurance help human Angiotensin-converting enzyme Human angiotensin-converting enzyme 2 information insurance MERS National Health Insurance Novel coronavirus nucleocapsid Papain Papain-like protease PLPro priming protease Protein provide RdRP reported RNA-dependent RNA polymerase SARS-CoV SARS-CoV-2 SARS-CoV-2 virus Serine Seven Spike protein Taiwan the binding affinity the SARS-CoV-2 virus TMPRSS2 transmembrane serine protease user Viral viral entry virus replication [DOI] 10.1093/nar/gkaa861 PMC 바로가기 [Article Type] AcademicSubjects/SCI00010
Existing antiviral options against SARS-CoV-2 replication in COVID-19 patientsCOVID-19 환자의 SARS-CoV-2 복제에 대한 기존 항바이러스 옵션Review Published on 2021-01-062022-09-10 Journal: Future Microbiology [Category] SARS, 신약개발, 치료제, [키워드] (RdRp) 3CLpro Antiviral Antiviral compounds antiviral drug antiviral drugs broad-spectrum antiviral broad-spectrum antivirals chymotrypsin coronavirus COVID-19 COVID-19 patient COVID-19 patients Critical develop Developing disease Drug repurposing effective Efficacy effort evaluated Infection inhibit International life cycle Papain Papain-like protease Pathogenesis PLPro protease RdRP respond RNA-dependent RNA polymerase S protein SARS-CoV-2 SARS-CoV-2 replication Spike protein Treatment virus replication virus spike protein [DOI] 10.2217/fmb-2020-0120 PMC 바로가기 [Article Type] Review
Computational drug discovery and repurposing for the treatment of COVID-19: A systematic reviewCOVID-19 치료를 위한 컴퓨터 약물 발견 및 용도 변경: 체계적인 검토Article Published on 2021-01-012022-08-31 Journal: Bioorganic chemistry [Category] SARS, 신약개발, 유전자 메커니즘, 치료법, 치료제, [키워드] AIDS Analysis Anticoagulant anticoagulant drug antiviral drug antiviral drugs applied approved approved drug approved drugs article asunaprevir Atazanavir AutoDock AutoDock vina best boceprevir Chloroquine clinical evidence clinical study Clocortolone CMV Computational drug computational method Computational methods COVID-19 COVID-19 progression COVID-19 therapy COVID-2019 crystal structure Dabigatran darunavir database disease disease outbreak docking tool dolutegravir drug Drug discovery Drug repurposing drugs Ebola efavirenz Efficacy eligible English entecavir FIVE formoterol Future Ganciclovir Grazoprevir HBV HCV Indinavir inhibit itraconazole life-threatening list Lomibuvir Lopinavir majority matter mechanism molecular mycophenolic acid nelfinavir non-structural protein non-structural proteins Novel coronavirus occurred offer outbreak Papain Papain-like protease Penciclovir protease provide raltegravir Remdesivir Repurposed drug Repurposed drugs ribavirin Ritonavir RNA-dependent RNA polymerase saquinavir SARS-CoV-2 SARS-CoV2 sequence Simeprevir systematic review telaprevir the disease therapeutic therapy treat Treatment treatment of COVID-19 [DOI] 10.1016/j.bioorg.2020.104490 PMC 바로가기 [Article Type] Article
Spatial and temporal roles of SARS-CoV PL pro -A snapshotSARS-CoV PL pro -A 스냅샷의 공간적 및 시간적 역할Review Published on 2021-01-012022-09-11 Journal: FASEB journal : official publication of the Federa [Category] 치료법, [키워드] 3CL pro accessory protein accessory proteins Antiviral appear autocleavage C-terminus can not cleave cleaved CoV replication cysteine cysteine protease dilemma domain E3 ubiquitin ligase envelope Factor inhibit inhibitor innate immune response Interaction interferon interferon-stimulated gene ISG15 its target protein its target proteins IκBα membrane motif NF-κB nonstructural protein nsp1 Nsp3 Nsps Nucleocapsid proteins p53 Papain Papain-like protease PLPro polyprotein polyproteins pp1a pp1ab promote protease Protein provide RCHY1 released Replication SARS-CoV SARS-CoV-2 SARS-CoV-2 infections stimulator STING TNF ubiquitin unique Viral Zinc [DOI] 10.1096/fj.202002271 PMC 바로가기 [Article Type] Review
Identification of novel human USP2 inhibitor and its putative role in treatment of COVID-19 by inhibiting SARS-CoV-2 papain-like (PLpro) protease새로운 인간 USP2 억제제의 식별 및 SARS-CoV-2 파파인 유사(PLpro) 프로테아제를 억제함으로써 COVID-19 치료에서 추정되는 역할Article Published on 2020-12-012022-09-11 Journal: Computational biology and chemistry [Category] SARS, 신약개발, 치료제, [키워드] adopted analyzed antiviral target asparagine aspartate assays best binding binding site carboxyl catalytic Cell Compound Consensus conserved COVID-19 COVID-19 outbreak Deubiquitination followed by functional H-bond interaction histidine Human identification identify implication in-silico In-vitro inhibit inhibiting inhibitor inhibitors innate immune response lack lead leukemia MD simulations molecular docking molecular interaction Papain Papain-like protease PLPro protease Proteases protocol reported residue SARS-CoV SARS-CoV-2 SARS-COV-2 infection SARS-CoV-2 papain-like protease (PLpro) selected tested Treatment Ubiquitin-specific protease 2 (USP2). urgency USP USP2 Virtual screening [DOI] 10.1016/j.compbiolchem.2020.107376 PMC 바로가기 [Article Type] Article