Mining genomic repositories to further our knowledge of the extent of SARS-CoV-2 co-infectionsPathogens and Epidemiology Published on 2024-01-162024-09-05 Journal: Microbial Genomics [Category] update2024, [키워드] Co-infection Pipeline Repository SARS-CoV-2 [DOI] 10.1099/mgen.0.001158 PMC 바로가기 [Article Type] Pathogens and Epidemiology
Cov2clusters: genomic clustering of SARS-CoV-2 sequencesArticle Published on 2022-10-192022-11-16 Journal: BMC Genomics [Category] COVID19(2023년), SARS, 유전자 메커니즘, [키워드] Accuracy advance approach bioinformatics Canada Cluster Clustering Combination COVID-19 pandemic epidemiological data epidemiologically Evidence genomic Genomic analysis global public health high accuracy High-resolution identify identifying increase in management mimicking pandemic pathogen Phylogenetic Phylogenetic tree produced producing Public public health Repository SARS-CoV-2 SARS-CoV-2 sequence SARS-CoV-2 sequence data sequence sequencing technology stability Surveillance the disease Transmission viral pathogen WGS whole genome sequence Whole genome sequencing [DOI] 10.1186/s12864-022-08936-4 PMC 바로가기
Risk of reinfection and disease after SARS-CoV-2 primary infection: Meta-analysisArticle Published on 2022-10-012022-11-16 Journal: European Journal of Clinical Investigation [Category] COVID19(2023년), SARS, 변종, [키워드] baseline cohort study COVID-19 criteria Critical disease evaluate evaluated Frequency Gender health care need individuals Infection lethal disease Meta-analysis natural immunity no substantial difference not affected omicron Omicron variant performed pooled rate Primary infection proportion reached Reinfection remained Repository risk SARS-CoV-2 searched severity stratified subject subjects subset vaccination vaccine dose viral strain were recorded [DOI] 10.1111/eci.13845 PMC 바로가기
Predicting COVID-19 disease severity from SARS-CoV-2 spike protein sequence by mixed effects machine learningResearch article Published on 2022-10-012022-10-05 Journal: Computers in biology and medicine [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] age and sex attribute bioinformatics chronic disease Comorbidity complex country COVID-19 COVID-19 disease severity data extraction Delta demonstrated Effect effort fixed GISAID heterogeneous include information Interpretation lack logistic regression models machine learning Meta-analysis Metadata Mild Mutation obesity omicron outcome pandemic Patient Predictive random random effect reduction in Repository risk robust SARS-CoV-2 SARS-CoV-2 sequence SARS-CoV-2 spike protein sequence severe disease severity Spike protein submitted subset time-consuming training vaccination variant viral genome sequence viral genomics virus while [DOI] 10.1016/j.compbiomed.2022.105969 [Article Type] Research article
Psychiatric treatment conducted via telemedicine versus in-person consultations in mood, anxiety and personality disorders: a protocol for a systematic review and meta-analysisArticle Published on 2022-09-282022-11-16 Journal: BMJ Open [Category] meta-analysis, [키워드] 95% CI adult psychiatry Anxiety APA approval assessment Bia calculate calculated Chi-square CINAHL comparable conducted COVID-19 COVID-19 pandemic cumulative data set development disorders dropout rate Effect Ethics Evidence heterogeneity include information technology Intervention Major mean difference Meta-analysis methodological outcomes participant Patient satisfaction platform Potential Primary outcome PROSPERO protocol Psychiatric Psychiatric disorders psychiatry PsycINFO randomised controlled trial Repository required risk risk of bia secondary outcome sensitivity analysis systematic review Telemedicine test for heterogeneity Treatment Web of Science widespread [DOI] 10.1136/bmjopen-2021-060690 PMC 바로가기
SARS-CoV-2 and post-donation information: a one-year experience of the French haemovigilance networkArticle Published on 2022-09-012022-11-15 Journal: Blood transfusion = Trasfusione del sangue [Category] SARS, 치료기술, [키워드] antigenic applied Blood blood donor COVID-19 symptom Culture deep sequencing demographic data Diagnosis Donor donors Duration elapsed Evidence experiment fraction French highlight Hypothesis information investigated material molecular MOST nasopharyngeal no difference parameter Paris PCR test PDI plasma plasmas positive questionnaire Region reported Repository RNA RNA sequencing SARS-CoV-2 SARS-CoV-2 RNA screened Sequencing Support Symptom tested Vero E6 cell Viral transmission Virological virus isolation was collected was determined [DOI] 10.2450/2022.0266-21 PMC 바로가기
Effectiveness of REGEN-COV antibody combination in preventing severe COVID-19 outcomes심각한 COVID-19 결과를 예방하는 REGEN-COV 항체 조합의 효과Article Published on 2022-08-022022-09-11 Journal: Nature Communications [Category] SARS, 변종, 임상, 진단, 치료법, [키워드] 95% CI antibody combination approved Casirivimab Clinical characteristics Combination COVID-19 COVID-19 hospitalization COVID-19 patients death defined delta variant demographic demographic and clinical characteristics determine Diagnosis effective Effectiveness Estimated FIVE hazard ratio healthcare high-risk patient High-risk patients Hospitalization Imdevimab infected with SARS-CoV-2 monoclonal antibodies monoclonal antibody outcome Patient performed reducing REGEN-COV Repository retrospective cohort study risk severe COVID-19 severe disease treated Treatment Treatment effectiveness used data were used [DOI] 10.1038/s41467-022-32253-9 PMC 바로가기 [Article Type] Article
SARS-CoV-2 infection impairs the insulin/IGF signaling pathway in the lung, liver, adipose tissue, and pancreatic cells via IRF1SARS-CoV-2 감염은 IRF1을 통해 폐, 간, 지방 조직 및 췌장 세포의 인슐린/IGF 신호 전달 경로를 손상시킵니다Article Published on 2022-08-012022-09-11 Journal: Metabolism: clinical and experimental [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] Activation adeno-associated virus adipose Adipose tissue AKT ameliorated analyzed association Autopsy Calu3 Calu3 cell CaLu3 cells Cell cell survival cells condition contribute COVID-19 COVID-19 pathology COVID-19 patient COVID-19 patients COVID-19 severity Critical critical patient critical patients cytokine determine Dexamethasone diabetes Diabetic diabetic patients Dihydrotestosterone Endocrine energy metabolism European population evaluate Evidence exacerbated exhibited Gain Gene Expression Genes GFP HEK293T Hospitalized Host human ACE2 human cells hyperglycemia impair impairment infected with SARS-CoV-2 insulin insulin resistance Insulin signaling Insulin/IGF signaling pathway interferon regulatory factor Interferone intron IRF1 liver lung Lungs male Male sex MAPK metabolic metabolic abnormalities Metabolic abnormality metabolism mouse model mTOR Multiorgan dysfunction Multiple organ damage Non-COVID-19 Non-COVID-19 patients obese obesity Older Older age Organoid overexpressing pancreatic Pancreatic cell pancreatic islets pathology patients patients with COVID-19 PI3K potential mechanism Prevalence provide Regulation reported Repository risk factor Risk factors SARS-CoV-2 SARS-CoV-2 infected cell SARS-CoV-2 infected cells SARS-COV-2 infection serotype severe COVID-19 severity Signaling signaling pathway significantly stem cell survival tissue tissue damage Tissue damage. tissues Transcriptome transcriptome dataset transcriptome datasets Transgenic mouse variant Whole blood whole blood transcriptome with COVID-19 [DOI] 10.1016/j.metabol.2022.155236 PMC 바로가기 [Article Type] Article
Clinical and epidemiological features of patients with COVID-19 reinfection: a systematic reviewReview article Published on 2022-08-012022-10-05 Journal: New Microbes and New Infections [Category] 치료기술, [키워드] Bia Case series clinical Community Comorbidity Contact COVID-19 database described discharge eligibility epidemiological feature FIVE Frequency healthcare Infection Meta-analysis negative test nine observational studies observational study occur Occurrence pandemic Patient patient with COVID-19 patients with COVID-19 positive ranged recurrence Recurrent Reinfection reported Repository Result risk of bia SARS-CoV-2 searched systematic review the Newcastle-Ottawa Scale the SARS-CoV-2 with COVID-19 [DOI] 10.1016/j.nmni.2022.101021 [Article Type] Review article
Genetic polymorphisms associated with susceptibility to COVID-19 disease and severity: A systematic review and meta-analysisCOVID-19 질병 및 중증도에 대한 감수성과 관련된 유전적 다형성: 체계적인 검토 및 메타 분석Meta-Analysis Published on 2022-07-062022-09-11 Journal: PLoS ONE [Category] 변종, [키워드] 95% CI ACE1 advanced age allele alleles analyzed ApoE article association C allele calculated candidate gene CCR5 clinical symptom Clinical symptoms Comorbidities contribute COVID-19 COVID-19 disease COVID-19 infection COVID-19 pathogenesis COVID-19 severity disease eligible fixed form forms Genetic polymorphism genetic polymorphisms Genetic variant genetic variants GWAS HLA HLA-A HLA-B HLA-C identify investigated involved loci Meta-analysis polymorphism Polymorphisms presence of comorbidity random Repository risk searched severe forms of COVID-19 severity of COVID-19 significantly Stata software suggested susceptibility systematic review the disease TMPRSS2 Variation [DOI] 10.1371/journal.pone.0270627 PMC 바로가기 [Article Type] Meta-Analysis