RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2Research Article Published on 2020-04-252022-10-30 Journal: Microbial Biotechnology [Category] COVID-19, SARS, [키워드] addition amplification applied caused China coronavirus COVID‐19 Diagnosis Diagnostic method domain extension feasible hospital hospitals isothermal amplification N gene outcome pandemic coronavirus positive primer Region RNA RNA extraction RNA virus S gene SARS‐CoV‐2 sensitivity Viral RNA virus was used WHO [DOI] 10.1111/1751-7915.13586 PMC 바로가기 [Article Type] Research Article
Rapid and visual detection of 2019 novel coronavirus (SARS-CoV-2) by a reverse transcription loop-mediated isothermal amplification assay역전사 루프 매개 등온 증폭 분석에 의한 2019 신종 코로나바이러스(SARS-CoV-2)의 신속하고 시각적인 검출Comparative Study Published on 2020-04-082022-09-25 Journal: Clinical microbiology and infection : the official [Category] SARS, 진단, [키워드] 2019 novel coronavirus 95% CI acute respiratory syndrome amplified Clinical diagnosis clinical samples clinically suspected close contact collected coronavirus COVID-19 cross-reactivity detection evaluate evaluated groups isothermal amplification MINI objective observation Patient positive powerful tool primer primer set Rapid Respiratory pathogens Result reverse transcription RNA RT-LAMP RT-PCR S gene SARS-CoV-2 SARS-CoV-2 detection SARS-COV-2 infection sensitivity Sensitivity and specificity specificity specimen suspected patients temperature the mean Total Viral RNA Visual [DOI] 10.1016/j.cmi.2020.04.001 PMC 바로가기 [Article Type] Comparative Study
Evolutionary Trajectory for the Emergence of Novel Coronavirus SARS-CoV-2Article Published on 2020-03-232022-10-28 Journal: Pathogens [Category] COVID-19, [키워드] Analysis ancestor antigenicity appear bat Community coronavirus CoV descendant elevated emergence evolutionary strategies genomic region genomic structure Genotype Helicase human host immune less membrane modify morbidity Mutation mutations nine novel nucleocapsid ORF3a outbreak over Phylogeny RdRP Recombination recombination or reassortment Region reproductive S gene SARS-CoV SARS-CoV-2 selected spike glycoprotein survival virus whole-genome [DOI] 10.3390/pathogens9030240 PMC 바로가기 [Article Type] Article
Genomic Characterization and Phylogenetic Classification of Bovine Coronaviruses Through Whole Genome Sequence AnalysisArticle Published on 2020-02-062022-10-28 Journal: Viruses [Category] Coronavirus, [키워드] addition Analysis Asian Bovine coronavirus characterization classical classification Cluster collected coronavirus country demonstrated European Evolution evolutionary dynamics Genes Genetic variation Genome genomic genomic sequence Genotype genotype classification genotypes Hemagglutinin-esterase humans information isolate Japan Japanese molecular nucleocapsid protein Open reading frame ORF1 ORFs Phylogenetic analysis Protein Respiratory disease ruminant S gene sequence spike glycoprotein Spike protein Spread Strains the disease Variation virus whole genome whole genome sequence widespread [DOI] 10.3390/v12020183 PMC 바로가기 [Article Type] Article
Molecular epidemiology, phylogenetic analysis and genotype distribution of hepatitis B virus in Saudi Arabia: Predominance of genotype D1Article Published on 2020-01-012023-06-13 Journal: Infection, genetics and evolution : journal of mol [Category] B형 간염, [키워드] Genotype Hepatitis B virus S gene [DOI] 10.1016/j.meegid.2019.104051
Investigation of the Role of the Spike Protein in Reversing the Virulence of the Highly Virulent Taiwan Porcine Epidemic Diarrhea Virus Pintung 52 Strains and Its Attenuated CounterpartArticle Published on 2019-12-302022-10-28 Journal: Viruses [Category] Coronavirus, MERS, [키워드] attenuate attenuation autologous caused chimeric Complete diarrhea epidemic diarrhea exhibiting genetics histological investigation lesion mortality rate Mutation parental Pathogenesis PEDV replacing reverse genetics role S gene Spike protein strain Taiwan the Spike Vaccine viral shedding virulence virulent virulent determinant virus viruses [DOI] 10.3390/v12010041 PMC 바로가기 [Article Type] Article
Characterization and Pathogenicity of the Porcine Deltacoronavirus Isolated in Southwest ChinaArticle Published on 2019-11-182022-10-28 Journal: Viruses [Category] Coronavirus, [키워드] 3′UTR amino acid changes Analysis Asia cause Cell Characteristics characterization characterized China Cytopathic effect death demonstrated diarrhea Epidemic Epidemiology Evolution gastrointestinal tract GenBank Genetic highly pathogenic identity immunofluorescence indicated Infection information insertion Isolated isolates Japan Microscopy molecular multiple organs Neonatal nine North America nucleotide mutation occurred ORF1ab gene passages pathogen pathogenicity Phylogenetic analysis Porcine deltacoronavirus ranged Recombination recombination event reported resulting S gene Sequencing analysis South Korea strain Strains TCID USA vomiting whole genome [DOI] 10.3390/v11111074 PMC 바로가기 [Article Type] Article
Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unitArticle Published on 2019-11-162022-11-01 Journal: Journal of Clinical Virology [Category] Coronavirus, MERS, [키워드] Amino acid analysed Asian Care-associated infections Cell characterized circulating Cluster collected defined European Genotype HCoV-OC43 Hematopoietic cell transplant hospital HSCT HSCT patient human coronavirus identify identity implicated Infection infections investigated involved isolate molecular nasal swab Next-generation sequencing objective Patient patients Phylogenetic phylogenetic analyses Phylogenetic tree recipients respiratory viral infection Result S gene sequence Stem cell transplantation strain Substitution the S protein Transmission were used while Whole genome sequencing whole-genome sequencing [DOI] 10.1016/j.jcv.2019.104206 PMC 바로가기 [Article Type] Article
Feline coronavirus with and without spike gene mutations detected by real-time RT-PCRs in cats with feline infectious peritonitisOriginal Article Published on 2019-11-152022-10-29 Journal: Journal of Feline Medicine and Surgery [Category] Coronavirus, [키워드] 95% CI 95% confidence interval association Blood calculated cerebrospinal fluid clinical conditions Combination contribute coronavirus diagnosed EDTA examined Examining FCoV Feline infectious peritonitis FIP gene mutation highlight Host IHC immune response immunohistochemistry incisional biopsy Infection investigated kidney liver Lymph node lymph nodes macrophages mutate mutated Mutation nucleotide objective popliteal positive Prevalence Probability real-time RT-PCR Replication Result RT-PCR S gene Sample serum spike gene spleen Spread tissue Variation virulence virulent [DOI] 10.1177/1098612X19886671 PMC 바로가기 [Article Type] Original Article
First detection of bovine coronavirus in Yak ( Bos grunniens ) and a bovine coronavirus genome with a recombinant HE geneResearch Article Published on 2019-05-012022-10-30 Journal: The Journal of General Virology [Category] Coronavirus, MERS, [키워드] Amino acid bovine Bovine coronavirus Characteristics collected Complete domain Evolution GenBank database Genetic Genome genome sequence HE gene recombination Isolation knowledge molecular molecular prevalence Mutation nucleocapsid Phylogenetic analysis plateau Prevalence Recombination recombination event RT-PCR assay S gene strain TCID the S1 subunit unique Variation virus were assessed Yak [DOI] 10.1099/jgv.0.001254 PMC 바로가기 [Article Type] Research Article