The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiologyArticle Published on 2024-05-082024-09-05 Journal: ArXiv [Category] update2024, [키워드] Data sharing Evolutionary biology mutational analysis Open Access viral genomics PMC 바로가기 [Article Type] Article
Molecular evolution of 2022 multi-country outbreak-causing monkeypox virus Clade IIbArticle Published on 2023-12-012024-09-05 Journal: iScience [Category] update2024, [키워드] Evolutionary biology Virology [DOI] 10.1016/j.isci.2023.108601 PMC 바로가기 [Article Type] Article
Differential RNA editing landscapes in host cell versus the SARS-CoV-2 genomearticle Published on 2023-09-302024-09-05 Journal: iScience [Category] update2024, [키워드] Evolutionary biology Virology [DOI] 10.1016/j.isci.2023.108031 PMC 바로가기 [Article Type] article
Genomic surveillance identifies potential risk factors for SARS-CoV-2 transmission at a mid-sized university in a small rural townarticle Published on 2023-05-162024-09-05 Journal: Burma Med J [Category] update2024, [키워드] Evolutionary biology Evolutionary genetics Genetics research Genomics Health policy Medical genetics phylogenetics [DOI] 10.1038/s41598-023-34625-7 PMC 바로가기 [Article Type] article
Zooanthroponotic transmission of SARS-CoV-2 and host-specific viral mutations revealed by genome-wide phylogenetic analysisArticle Published on 2023-04-042023-06-22 Journal: eLife [Category] 조류인플루엔자, [키워드] Evolutionary biology Genome-wide association study Genomic epidemiology Phylogeny SARS-CoV-2 viral evolution viruses zooanthroponosis [DOI] 10.7554/eLife.83685 PMC 바로가기
Evolution of increased positive charge on the SARS-CoV-2 spike protein may be adaptation to human transmissionarticle Published on 2023-02-182024-09-05 Journal: iScience [Category] update2024, [키워드] Evolutionary biology Virology [DOI] 10.1016/j.isci.2023.106230 PMC 바로가기 [Article Type] article
Genomic diversity of SARS-CoV-2 can be accelerated by mutations in the nsp14 genearticle Published on 2023-02-162024-09-05 Journal: iScience [Category] update2024, [키워드] Evolutionary biology Virology [DOI] 10.1016/j.isci.2023.106210 PMC 바로가기 [Article Type] article
Identifying species-specific k-mers for fast and accurate metagenotyping with Maast and GT-ProProtocol Published on 2023-01-202024-09-05 Journal: STAR Protocols [Category] update2024, [키워드] bioinformatics Evolutionary biology genetics Genomics Microbiology Sequence analysis [DOI] 10.1016/j.xpro.2022.101964 PMC 바로가기 [Article Type] Protocol
Interleukin-18 and COVID-19Original Paper Published on 2022-12-162022-11-01 Journal: Epidemiology and Infection [Category] COVID-19, SARS, [키워드] 95% CI 95% confidence interval Analysis applied association conducted Coronavirus Disease (COVID)-19 COVID-19 cytokine estimate Evolutionary biology experimental design Exploratory analysis Genetic Genome-wide association study genome-wide significant hospitalised IFN Immunity interferon interferon gamma Interleukin-18 investigated less liberal lower risk Mendelian randomisation Odds ratio precursor predicted predictor predictors Prevent randomisation severe COVID-19 severity Standard deviation vulnerability was related with COVID-19 [DOI] 10.1017/S0950268821002636 PMC 바로가기 [Article Type] Original Paper
Genomic epidemiology of the first two waves of SARS-CoV-2 in Canada캐나다 SARS-CoV-2의 첫 두 파동의 게놈 역학Article Published on 2022-08-022022-09-11 Journal: eLife [Category] SARS, 변종, 유전자 메커니즘, 진단, [키워드] 95% confidence interval B.1.1.7 Canada circulating contributed COVID-19 COVID-19 case COVID-19 cases Critical declined descendants drastic reduction Effectiveness Epidemiology Evolutionary biology First wave Genomics global health highlighting implementation in viral increasingly India International Intervention introduced investigated likelihood lineages maximum molecular Molecular epidemiology National outbreak persistence Phylogenetic tree phylogenetics predominant Prevalence public health Public health interventions reduce reducing resulting SARS-CoV-2 SARS-CoV-2 lineage second wave Spread summer sustained the timing Transmission Travel USA variant variants of concern Viral virus viruses VOCs were used [DOI] 10.7554/eLife.73896 PMC 바로가기 [Article Type] Article